RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PRR16Q569H4 304 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 HERC6Q8IVU3 1022 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 SMAP1Q8IYB5 467 aaPredicted RBP14.86□□□□□ -0.03
HDAC1-203ENST00000463172 BLIDQ8IZY5 108 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 MYLIPQ8WY64 445 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 APBB2Q92870 758 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 LARP6Q9BRS8 491 aaKnown RBP14.86□□□□□ -0.03
HDAC1-203ENST00000463172 NKX2-4Q9H2Z4 354 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 STK36Q9NRP7 1315 aa14.86□□□□□ -0.03
HDAC1-203ENST00000463172 IGLV3-22A0A075B6J6 115 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 DDX39AO00148 427 aaKnown RBP14.85□□□□□ -0.03
HDAC1-203ENST00000463172 TLL1O43897 1013 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 AMHP03971 560 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 PSAPP07602 524 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 RABGGTBP53611 331 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 AK2P54819 239 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 WDR5P61964 334 aaKnown RBP14.85□□□□□ -0.03
HDAC1-203ENST00000463172 ADAM17P78536 824 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 SCRN1Q12765 414 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 HIC1Q14526 733 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 GRIN2CQ14957 1233 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 ZNF746Q6NUN9 644 aaPredicted RBP14.85□□□□□ -0.03
HDAC1-203ENST00000463172 RPAINQ86UA6 219 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 DAGLBQ8NCG7 672 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 CRYGNQ8WXF5 182 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 WNT8BQ93098 351 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 VWCEQ96DN2 955 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 BRMS1Q9HCU9 246 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 ZNF302Q9NR11 478 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 SAMM50Q9Y512 469 aa14.85□□□□□ -0.03
HDAC1-203ENST00000463172 COL6A3P12111 3177 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 POTEB3A0JP26 581 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 HBP1O60381 514 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 ATG7O95352 703 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 CTSHP09668 335 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 NEK4P51957 841 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 IGBP1P78318 339 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 NONOQ15233 471 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC1-203ENST00000463172 FAM26DQ5JW98 314 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 IER5Q5VY09 327 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 PDXDC2PQ6P474 469 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 POTEBQ6S5H4 581 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 KRT25Q7Z3Z0 450 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 CKAP2LQ8IYA6 745 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 MAFAQ8NHW3 353 aaPredicted RBP14.84□□□□□ -0.03
HDAC1-203ENST00000463172 RASGRP4Q8TDF6 673 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 IL17RAQ96F46 866 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 NAP1L4Q99733 375 aaKnown RBP14.84□□□□□ -0.03
HDAC1-203ENST00000463172 TPCN1Q9ULQ1 816 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 TELO2Q9Y4R8 837 aa14.84□□□□□ -0.03
HDAC1-203ENST00000463172 MICAL3Q7RTP6 2002 aa14.83□□□□□ -0.03
HDAC1-203ENST00000463172 CCDC194A0A1B0GVG4 234 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 MBLAC1A4D2B0 266 aaPredicted RBP14.83□□□□□ -0.04
HDAC1-203ENST00000463172 WDR64B1ANS9 1081 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 INSRRP14616 1297 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 PLCB4Q15147 1175 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 PLEKHG4Q58EX7 1191 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 TRAF7Q6Q0C0 670 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 ABHD15Q6UXT9 468 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 DBF4BQ8NFT6 615 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 TBCKQ8TEA7 893 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 FAM167AQ96KS9 214 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 RIT2Q99578 217 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 TEKT3Q9BXF9 490 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 CEP131Q9UPN4 1083 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 YBX2Q9Y2T7 364 aaKnown RBP14.83□□□□□ -0.04
HDAC1-203ENST00000463172 PCDHA10Q9Y5I2 948 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 COL1A2P08123 1366 aa14.83□□□□□ -0.04
HDAC1-203ENST00000463172 IGKV6D-21A0A0A0MT36 114 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 GAS7O60861 476 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 CA3P07451 260 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 SFNP31947 248 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 JAK3P52333 1124 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 TRIM29Q14134 588 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 MBTPS1Q14703 1052 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 GPNMBQ14956 572 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 ZNF484Q5JVG2 852 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 SWSAP1Q6NVH7 229 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 MOXD1Q6UVY6 613 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 FAM43BQ6ZT52 329 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-203ENST00000463172 NME8Q8N427 588 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 ATP8B4Q8TF62 1192 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 PCYT2Q99447 389 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 RAD9AQ99638 391 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 IFIH1Q9BYX4 1025 aaKnown RBP14.82□□□□□ -0.04
HDAC1-203ENST00000463172 PRDM12Q9H4Q4 367 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 ORC3Q9UBD5 711 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-203ENST00000463172 PCDHA2Q9Y5H9 948 aa14.82□□□□□ -0.04
HDAC1-203ENST00000463172 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
HDAC1-203ENST00000463172 GJB5O95377 273 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 CCNE2O96020 404 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 MRPS6P82932 125 aaKnown RBP14.81□□□□□ -0.04
HDAC1-203ENST00000463172 Q4G0T1 1027 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 ODR4Q5SWX8 454 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 LRCH2Q5VUJ6 765 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 USP38Q8NB14 1042 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 RDM1Q8NG50 284 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 DNAJB3Q8WWF6 145 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 BBXQ8WY36 941 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-203ENST00000463172 GTF3C6Q969F1 213 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms