RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 PPFIA1Q13136 1202 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 NR5A1Q13285 461 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 TRIM29Q14134 588 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 LETM2Q2VYF4 491 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 GPR153Q6NV75 609 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 MIS18BP1Q6P0N0 1132 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 PIK3AP1Q6ZUJ8 805 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 NEK8Q86SG6 692 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 SLC5A5Q92911 643 aa21.34■■□□□ 1.01
COL9A3-203ENST00000462700 BACH1O14867 736 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 SMAD3P84022 425 aaKnown RBP21.33■■□□□ 1.01
COL9A3-203ENST00000462700 GPNMBQ14956 572 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 GRIK4Q16099 956 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 EARS2Q5JPH6 523 aaKnown RBP21.33■■□□□ 1.01
COL9A3-203ENST00000462700 ZNF618Q5T7W0 954 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 KRT40Q6A162 431 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 TRAF7Q6Q0C0 670 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 OTOP2Q7RTS6 562 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 CCDC60Q8IWA6 550 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-203ENST00000462700 SMAP1Q8IYB5 467 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-203ENST00000462700 TNFRSF25Q93038 417 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 RIT2Q99578 217 aa21.33■■□□□ 1.01
COL9A3-203ENST00000462700 MTIF3Q9H2K0 278 aaKnown RBP21.33■■□□□ 1.01
COL9A3-203ENST00000462700 LAMA2P24043 3122 aaKnown RBP21.33■■□□□ 1
COL9A3-203ENST00000462700 PARNO95453 639 aaKnown RBP21.32■■□□□ 1
COL9A3-203ENST00000462700 THPOP40225 353 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 SLC26A2P50443 739 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 HMGN5P82970 282 aaKnown RBP21.32■■□□□ 1
COL9A3-203ENST00000462700 PLCB4Q15147 1175 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 LRCH2Q5VUJ6 765 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 FAM160B1Q5W0V3 765 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 DIS3L2Q8IYB7 885 aaKnown RBP21.32■■□□□ 1
COL9A3-203ENST00000462700 BACH2Q9BYV9 841 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 ZNF302Q9NR11 478 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 CXXC1Q9P0U4 656 aaPredicted RBP21.32■■□□□ 1
COL9A3-203ENST00000462700 DDX25Q9UHL0 483 aaKnown RBP21.32■■□□□ 1
COL9A3-203ENST00000462700 TRPC6Q9Y210 931 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 SZT2Q5T011 3432 aa21.32■■□□□ 1
COL9A3-203ENST00000462700 FAM205CA6NFA0 338 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 SLC37A4O43826 429 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 GAS7O60861 476 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 CAND2O75155 1236 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 INSRRP14616 1297 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 MARCH8Q5T0T0 291 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 PPP4R3AQ6IN85 833 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 SWSAP1Q6NVH7 229 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 ETNPPLQ8TBG4 499 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 TNPO1Q92973 898 aaKnown RBP21.31■■□□□ 1
COL9A3-203ENST00000462700 GJA10Q969M2 543 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 TEKT3Q9BXF9 490 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 FTOQ9C0B1 505 aaKnown RBP eCLIP21.31■■□□□ 1
COL9A3-203ENST00000462700 TUBE1Q9UJT0 475 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 PCDHA10Q9Y5I2 948 aa21.31■■□□□ 1
COL9A3-203ENST00000462700 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.3■■□□□ 1
COL9A3-203ENST00000462700 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.3■■□□□ 1
COL9A3-203ENST00000462700 POTEB3A0JP26 581 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 MBLAC1A4D2B0 266 aaPredicted RBP21.3■■□□□ 1
COL9A3-203ENST00000462700 RRN3P2A6NIE6 340 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 WDR64B1ANS9 1081 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 BTBD18B2RXH4 712 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 NBNO60934 754 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 PSMD10O75832 226 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 CD2BP2O95400 341 aaKnown RBP21.3■■□□□ 1
COL9A3-203ENST00000462700 CXCL10P02778 98 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 PSAPP07602 524 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 ACTN1P12814 892 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 GCFC2P16383 781 aaKnown RBP21.3■■□□□ 1
COL9A3-203ENST00000462700 IGBP1P78318 339 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 FAM109BQ6ICB4 259 aaPredicted RBP21.3■■□□□ 1
COL9A3-203ENST00000462700 PDXDC2PQ6P474 469 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 POTEBQ6S5H4 581 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 RUFY4Q6ZNE9 571 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 NAP1L4Q99733 375 aaKnown RBP21.3■■□□□ 1
COL9A3-203ENST00000462700 UNC45AQ9H3U1 944 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 SAMM50Q9Y512 469 aa21.3■■□□□ 1
COL9A3-203ENST00000462700 MAFBQ9Y5Q3 323 aaPredicted RBP21.3■■□□□ 1
COL9A3-203ENST00000462700 RSPH10B2B2RC85 870 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 CHMP2AO43633 222 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 CCNT1O60563 726 aaKnown RBP21.29■■□□□ 1
COL9A3-203ENST00000462700 RSPH10BP0C881 870 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 GUCY1B3Q02153 619 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 MBTPS1Q14703 1052 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 TAF2Q6P1X5 1199 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 ATP8B4Q8TF62 1192 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 C8orf76Q96K31 380 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 DISC1Q9NRI5 854 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 SCN5AQ14524 2016 aa21.29■■□□□ 1
COL9A3-203ENST00000462700 ZBBXA8MT70 800 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 HBP1O60381 514 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 CTSHP09668 335 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 ATP4AP20648 1035 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 SFNP31947 248 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 JAK3P52333 1124 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 B3GNT9Q6UX72 402 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 RPAINQ86UA6 219 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 FAM184AQ8NB25 1140 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 TMX3Q96JJ7 454 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 KCNMB3Q9NPA1 279 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 GABBR1Q9UBS5 961 aa21.28■■□□□ 1
COL9A3-203ENST00000462700 IGSF9BQ9UPX0 1349 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms