RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 SH2D3CQ8N5H7 860 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 FAM133AQ8N9E0 248 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 EIF1ADQ8N9N8 165 aaKnown RBP8.12□□□□□ -1.11
SREBF2-204ENST00000462539 USP38Q8NB14 1042 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 RPGRQ92834 1020 aaKnown RBP8.12□□□□□ -1.11
SREBF2-204ENST00000462539 GJA10Q969M2 543 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 KRT12Q99456 494 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 PAGR1Q9BTK6 254 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 ANO3Q9BYT9 981 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 DHX36Q9H2U1 1008 aaKnown RBP8.12□□□□□ -1.11
SREBF2-204ENST00000462539 EPB41L5Q9HCM4 733 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 KCNMB3Q9NPA1 279 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 PLCB1Q9NQ66 1216 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 TBC1D7Q9P0N9 293 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 SWAP70Q9UH65 585 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 HDAC9Q9UKV0 1011 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 FAM169AQ9Y6X4 670 aa8.12□□□□□ -1.11
SREBF2-204ENST00000462539 NCANO14594 1321 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 CYP3A7-CYP3A51PA0A087WV96 503 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 ESYT3A0FGR9 886 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 SRRM3A6NNA2 597 aaPredicted RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 USP17L10C9JJH3 530 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 EBAG9O00559 213 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 CETN3O15182 167 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 RAD51CO43502 376 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 ZEB2O60315 1214 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 MED24O75448 989 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 CYP3A7P24462 503 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 PRKCIP41743 596 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 USP11P51784 963 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 MRPL12P52815 198 aaKnown RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 ERVK-9P63128 1117 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 VPS72Q15906 364 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 CDC37Q16543 378 aaPredicted RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 GPATCH4Q5T3I0 446 aaKnown RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 MOXD1Q6UVY6 613 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 EPM2AIP1Q7L775 607 aaPredicted RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 FRMD5Q7Z6J6 570 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 LRRC57Q8N9N7 239 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 BCAS4Q8TDM0 211 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 TAF4BQ92750 862 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 PBKQ96KB5 322 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 ATP6V1G3Q96LB4 118 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 GLT8D2Q9H1C3 349 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 DDX4Q9NQI0 724 aaKnown RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 BMP2KQ9NSY1 1161 aaPredicted RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 EMILIN3Q9NT22 766 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 PACSIN2Q9UNF0 486 aaPredicted RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
SREBF2-204ENST00000462539 ZNFX1Q9P2E3 1918 aaKnown RBP8.11□□□□□ -1.11
SREBF2-204ENST00000462539 ASTN1O14525 1302 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 HMGB1P1B2RPK0 211 aaPredicted RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 SLC16A3O15427 465 aaKnown RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 MARCH6O60337 910 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 AFPP02771 609 aaKnown RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 POTEIP0CG38 1075 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 ACTN1P12814 892 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 NR1D1P20393 614 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 ECHS1P30084 290 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 RFC4P35249 363 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 STAT3P40763 770 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 EPS15P42566 896 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 DNA2P51530 1060 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 GUCY2FP51841 1108 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 CASP5P51878 434 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 JAM2P57087 298 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 SPIRE1Q08AE8 756 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 KCNH2Q12809 1159 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 AP3B2Q13367 1082 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 PICALMQ13492 652 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 GIT2Q14161 759 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 EPHA7Q15375 998 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 RPS6KA1Q15418 735 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 IFI16Q16666 785 aaKnown RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 BMT2Q1RMZ1 405 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 KIAA0753Q2KHM9 967 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 QRICH1Q2TAL8 776 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 ARSHQ5FYA8 562 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 HERC4Q5GLZ8 1057 aaPredicted RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 TTC19Q6DKK2 380 aaPredicted RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 POTEGQ6S5H5 508 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 POTEEQ6S8J3 1075 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 ZNF571Q7Z3V5 609 aaPredicted RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 IRF2BP2Q7Z5L9 587 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 SFR1Q86XK3 245 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 OLIG1Q8TAK6 271 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 ETNPPLQ8TBG4 499 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 TBC1D16Q8TBP0 767 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 ACTRT1Q8TDG2 376 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 SCFD2Q8WU76 684 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 IFT81Q8WYA0 676 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 RBM17Q96I25 401 aaKnown RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 CALR3Q96L12 384 aaKnown RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.1□□□□□ -1.11
SREBF2-204ENST00000462539 ISCUQ9H1K1 167 aa8.1□□□□□ -1.11
SREBF2-204ENST00000462539 TAF1DQ9H5J8 278 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms