RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 MEIS1O00470 390 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 CHMP2AO43633 222 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 TLL1O43897 1013 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 HBP1O60381 514 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 LGR5O75473 907 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 GCFC2P16383 781 aaKnown RBP10.12□□□□□ -0.79
DDX39B-216ENST00000462421 CLK2P49760 499 aaKnown RBP10.12□□□□□ -0.79
DDX39B-216ENST00000462421 HMGN5P82970 282 aaKnown RBP10.12□□□□□ -0.79
DDX39B-216ENST00000462421 SCRN1Q12765 414 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 LETM2Q2VYF4 491 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 LRCH2Q5VUJ6 765 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 PLPPR4Q7Z2D5 763 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 SERINC5Q86VE9 423 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 TBCKQ8TEA7 893 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 MAP7D2Q96T17 732 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
DDX39B-216ENST00000462421 NRBP2Q9NSY0 501 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 LIMCH1Q9UPQ0 1083 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 STXBP5LQ9Y2K9 1186 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 PCDHA10Q9Y5I2 948 aa10.12□□□□□ -0.79
DDX39B-216ENST00000462421 TREHO43280 583 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 ATP9AO75110 1047 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 ARP10275 920 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 EPHB4P54760 987 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 SEMA3FQ13275 785 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 COL9A3Q14050 684 aaPredicted RBP10.11□□□□□ -0.79
DDX39B-216ENST00000462421 RABEP1Q15276 862 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 PKN1Q16512 942 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 ZNF484Q5JVG2 852 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 ZNF618Q5T7W0 954 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 Q7L0L9 218 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 MIER3Q7Z3K6 550 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 NEK8Q86SG6 692 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 DAGLBQ8NCG7 672 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 RASGRP4Q8TDF6 673 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 LMBR1Q8WVP7 490 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 GTF3C6Q969F1 213 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 FAM49AQ9H0Q0 323 aaPredicted RBP10.11□□□□□ -0.79
DDX39B-216ENST00000462421 RNPEPQ9H4A4 650 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 ZNF576Q9H609 170 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 DDX25Q9UHL0 483 aaKnown RBP10.11□□□□□ -0.79
DDX39B-216ENST00000462421 TPCN1Q9ULQ1 816 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 PCDHA11Q9Y5I1 949 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 LCTP09848 1927 aa10.11□□□□□ -0.79
DDX39B-216ENST00000462421 TRIOBPQ9H2D6 2365 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 CCNT1O60563 726 aaKnown RBP10.1□□□□□ -0.79
DDX39B-216ENST00000462421 IGFBP4P22692 258 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 DNM2P50570 870 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 RBL2Q08999 1139 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 NTRK3Q16288 839 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 SWSAP1Q6NVH7 229 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 PIK3AP1Q6ZUJ8 805 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 TRMT1LQ7Z2T5 733 aaKnown RBP10.1□□□□□ -0.79
DDX39B-216ENST00000462421 EXOC8Q8IYI6 725 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 MYOCDQ8IZQ8 938 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 ZNF710Q8N1W2 664 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 NME8Q8N427 588 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 METTL13Q8N6R0 699 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 USP38Q8NB14 1042 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 RDM1Q8NG50 284 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
DDX39B-216ENST00000462421 RIT2Q99578 217 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 JPH2Q9BR39 696 aaPredicted RBP10.1□□□□□ -0.79
DDX39B-216ENST00000462421 SEMA6BQ9H3T3 888 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 DISC1Q9NRI5 854 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 LRFN2Q9ULH4 789 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 NOL7Q9UMY1 257 aaKnown RBP10.1□□□□□ -0.79
DDX39B-216ENST00000462421 GINS2Q9Y248 185 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 COL1A2P08123 1366 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 LTBP2Q14767 1821 aa10.1□□□□□ -0.79
DDX39B-216ENST00000462421 BAZ2BQ9UIF8 2168 aaKnown RBP10.09□□□□□ -0.79
DDX39B-216ENST00000462421 GSTTP1A0A1W2PQM5 241 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 FAM86B1E9PN63 330 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 MAGEB2O15479 319 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 FAM86B2P0C5J1 330 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 INSRRP14616 1297 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 CIITAP33076 1130 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 MCM2P49736 904 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 FOSBP53539 338 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 ZNF200P98182 395 aaPredicted RBP10.09□□□□□ -0.79
DDX39B-216ENST00000462421 PAK2Q13177 524 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 INF2Q27J81 1249 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 Q4G0T1 1027 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 MOXD1Q6UVY6 613 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 FAM43BQ6ZT52 329 aaPredicted RBP10.09□□□□□ -0.79
DDX39B-216ENST00000462421 SLFN12Q8IYM2 578 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 NECAB1Q8N987 351 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 SLC17A8Q8NDX2 589 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 CYP2W1Q8TAV3 490 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 ATP8B4Q8TF62 1192 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 YME1L1Q96TA2 773 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 FTHL17Q9BXU8 183 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 PBX4Q9BYU1 374 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 IFIH1Q9BYX4 1025 aaKnown RBP10.09□□□□□ -0.79
DDX39B-216ENST00000462421 NKX2-4Q9H2Z4 354 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 MTMR10Q9NXD2 777 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 GABBR1Q9UBS5 961 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms