RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 ZNF536O15090 1300 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 PTPRAP18433 802 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 USP8P40818 1118 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 GRB10Q13322 594 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 KCNK18Q7Z418 384 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 FAM160B2Q86V87 743 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 KIAA1683Q9H0B3 1180 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 PICK1Q9NRD5 415 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 TAB2Q9NYJ8 693 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 PPP1R3GB7ZBB8 358 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 NFIBO00712 420 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 EIF3HO15372 352 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■■□□□ 11.5
TNRC6A-204ENST00000462400 GTPBP6O43824 516 aaPredicted RBP13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 AP3B2Q13367 1082 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 CCDC122Q5T0U0 273 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 CCNI2Q6ZMN8 369 aaPredicted RBP13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 KLRG1Q96E93 195 aa13.23□□□□□ -0.29
TNRC6A-204ENST00000462400 WDR46O15213 610 aaKnown RBP13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 RPN1P04843 607 aaKnown RBP13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 ALAS1P13196 640 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 MOB2Q70IA6 237 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 HPS3Q969F9 1004 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 JAKMIP2Q96AA8 810 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 AK8Q96MA6 479 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 PCDHA12Q9UN75 941 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 GRIN2DO15399 1336 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 ZNF185O15231 689 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 ZNF76P36508 570 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 CKAP4Q07065 602 aaKnown RBP13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 GLT8D2Q9H1C3 349 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 HAUS4Q9H6D7 363 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 ZNF112Q9UJU3 913 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 CAPN7Q9Y6W3 813 aa13.22□□□□□ -0.29
TNRC6A-204ENST00000462400 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 PEX10O60683 326 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 SREBF1P36956 1147 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 COPB1P53618 953 aaKnown RBP13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 BACE1P56817 501 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 C2orf54Q08AI8 447 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 PRPF38AQ8NAV1 312 aaKnown RBP13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 ZNF280CQ8ND82 737 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 LENG9Q96B70 501 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 ATG4CQ96DT6 458 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 CALML4Q96GE6 196 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 GSDMAQ96QA5 445 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 PURBQ96QR8 312 aaKnown RBP13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 ADARB2Q9NS39 739 aaKnown RBP13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 BLOC1S4Q9NUP1 217 aa13.21□□□□□ -0.29
TNRC6A-204ENST00000462400 H0YHG0 523 aa13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 USP2O75604 605 aaPredicted RBP13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 USP11P51784 963 aa13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 TRIM14Q14142 442 aa13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 PAPD7Q5XG87 772 aaKnown RBP13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 SND1Q7KZF4 910 aaKnown RBP eCLIP13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 DYMQ7RTS9 669 aa13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 KBTBD4Q9NVX7 518 aa13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 COL20A1Q9P218 1284 aa13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 LIMA1Q9UHB6 759 aaKnown RBP13.21□□□□□ -0.3
TNRC6A-204ENST00000462400 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 KLRC4O43908 158 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 GCFC2P16383 781 aaKnown RBP13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 UBXN1Q04323 297 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 ORC2Q13416 577 aaPredicted RBP13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 LPAR1Q92633 364 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 FAM184BQ9ULE4 1060 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 POTECB2RU33 542 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 MYO1FO00160 1098 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 PLA2G6O60733 806 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 ICAM1P05362 532 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 HERVK_113P62684 666 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 ASIC1P78348 528 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 SETQ01105 290 aaPredicted RBP13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 GPR162Q16538 588 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 KRT79Q5XKE5 535 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 GBP6Q6ZN66 633 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 KIAA1328Q86T90 577 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 ETNPPLQ8TBG4 499 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 DCPSQ96C86 337 aaKnown RBP13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 PKD2L1Q9P0L9 805 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 CEP83Q9Y592 693 aa13.2□□□□□ -0.3
TNRC6A-204ENST00000462400 ABCB11O95342 1321 aa13.19□□□□□ -0.3
TNRC6A-204ENST00000462400 TTC26A0AVF1 554 aa13.19□□□□□ -0.3
TNRC6A-204ENST00000462400 KCNJ18B7U540 433 aa13.19□□□□□ -0.3
TNRC6A-204ENST00000462400 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
TNRC6A-204ENST00000462400 NDUFAB1O14561 156 aa13.19□□□□□ -0.3
TNRC6A-204ENST00000462400 MSH4O15457 936 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms