RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 FAM13AO94988 1023 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 EDN3P14138 238 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 SPINK2P20155 84 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 TDO2P48775 406 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 NLRP12P59046 1061 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 SEPT2Q15019 361 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 ABCB5Q2M3G0 1257 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 KIAA1755Q5JYT7 1200 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 AKNAD1Q5T1N1 836 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 PHLDB3Q6NSJ2 640 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 FAM43AQ8N2R8 423 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 FBXL16Q8N461 479 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 CRACR2BQ8N4Y2 399 aaPredicted RBP6.79□□□□□ -1.32
VPS36-202ENST00000462289 RUSC1Q9BVN2 902 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 BHLHE41Q9C0J9 482 aaPredicted RBP6.79□□□□□ -1.32
VPS36-202ENST00000462289 BCL11AQ9H165 835 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 KANSL2Q9H9L4 492 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 ZNF287Q9HBT7 754 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 PICK1Q9NRD5 415 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 RNF186Q9NXI6 227 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 MTMR4Q9NYA4 1195 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 CTNNA3Q9UI47 895 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 ADAMTS5Q9UNA0 930 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 AGTPBP1Q9UPW5 1226 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 TAF6LQ9Y6J9 622 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 LCTP09848 1927 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 MYH6P13533 1939 aa6.79□□□□□ -1.32
VPS36-202ENST00000462289 RBBP6Q7Z6E9 1792 aaKnown RBP6.79□□□□□ -1.32
VPS36-202ENST00000462289 NEDD4P46934 1319 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 MYPNQ86TC9 1320 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 CCL15-CCL14A0A0B4J2E2 113 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 SOX1O00570 391 aaPredicted RBP6.78□□□□□ -1.32
VPS36-202ENST00000462289 FOXN1O15353 648 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 SART1O43290 800 aaKnown RBP6.78□□□□□ -1.32
VPS36-202ENST00000462289 FZD6O60353 706 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 TLR2O60603 784 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 PLA2G6O60733 806 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 PHACTR2O75167 634 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 SNHG28P0DPA3 235 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 HSPA8P11142 646 aaKnown RBP6.78□□□□□ -1.32
VPS36-202ENST00000462289 BMP3P12645 472 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 ARL4DP49703 201 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 PDE4BQ07343 736 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 SPP2Q13103 211 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 SEC23AQ15436 765 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 CCL15Q16663 113 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 PEAR1Q5VY43 1037 aaPredicted RBP6.78□□□□□ -1.32
VPS36-202ENST00000462289 HGSNATQ68CP4 663 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 C17orf99Q6UX52 265 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 BEND4Q6ZU67 534 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 STOX1Q6ZVD7 989 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 FASTKD5Q7L8L6 764 aaKnown RBP6.78□□□□□ -1.32
VPS36-202ENST00000462289 CCDC84Q86UT8 332 aaPredicted RBP6.78□□□□□ -1.32
VPS36-202ENST00000462289 AMOTL1Q8IY63 956 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 GJD3Q8N144 294 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 GMCL1P1Q8NEA9 526 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 ACER1Q8TDN7 264 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 SLC7A3Q8WY07 619 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 LPAR1Q92633 364 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 CEP95Q96GE4 821 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 TMPRSS13Q9BYE2 586 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 R3HDMLQ9H3Y0 253 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 SUGCTQ9HAC7 445 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 AS3MTQ9HBK9 375 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 PRDM10Q9NQV6 1147 aa6.78□□□□□ -1.32
VPS36-202ENST00000462289 WDR19Q8NEZ3 1342 aa6.77□□□□□ -1.32
VPS36-202ENST00000462289 BAZ2BQ9UIF8 2168 aaKnown RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 MINDY4BA8MYZ0 360 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 IGHA2P01877 340 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 SLC3A2P08195 630 aaKnown RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 HSPA1AP0DMV8 641 aaKnown RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 HSPA1BP0DMV9 641 aaKnown RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 VCAM1P19320 739 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 HSPA4P34932 840 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 GRIK1P39086 918 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 USP14P54578 494 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 ANTXR2P58335 489 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 CAP1Q01518 475 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 ICA1Q05084 483 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 CRHR2Q13324 411 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 IKBKEQ14164 716 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 SLC4A8Q2Y0W8 1093 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 TREML2Q5T2D2 321 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 FDX2Q6P4F2 183 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 DTX1Q86Y01 620 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 MB21D2Q8IYB1 491 aaPredicted RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 TTC14Q96N46 770 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 AGXT2Q9BYV1 514 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 RNF41Q9H4P4 317 aaPredicted RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 VCPKMTQ9H867 229 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 INCENPQ9NQS7 918 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 MORF4L1Q9UBU8 362 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 FOXD3Q9UJU5 478 aaPredicted RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 MTMR7Q9Y216 660 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 RBM8AQ9Y5S9 174 aaKnown RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 KIAA0100Q14667 2235 aaKnown RBP6.77□□□□□ -1.33
VPS36-202ENST00000462289 PLXNA1Q9UIW2 1896 aa6.77□□□□□ -1.33
VPS36-202ENST00000462289 TRIM75PA6NK02 468 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 ZNF213O14771 459 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 SLC27A2O14975 620 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms