RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 NSMFQ6X4W1 530 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 FCRL2Q96LA5 508 aaPredicted RBP6.54□□□□□ -1.36
COPS3-204ENST00000462236 CDC6Q99741 560 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 DHRS4Q9BTZ2 278 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 MINPP1Q9UNW1 487 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 GPR55Q9Y2T6 319 aaPredicted RBP6.54□□□□□ -1.36
COPS3-204ENST00000462236 PTCH2Q9Y6C5 1203 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 SCN7AQ01118 1682 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 TRBV23-1A0A0A0MS06 115 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 TMEM82A0PJX8 343 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 ERVV-2B6SEH9 535 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 TBX1O43435 398 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 SMARCA5O60264 1052 aaPredicted RBP6.53□□□□□ -1.36
COPS3-204ENST00000462236 WNT11O96014 354 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 SEPHS1P49903 392 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 ZP2Q05996 745 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 BNIP3Q12983 259 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 SQSTM1Q13501 440 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 PLEKHG4Q58EX7 1191 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 SPRED2Q7Z698 418 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 WFDC3Q8IUB2 231 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 IFNL2Q8IZJ0 200 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 FLCNQ8NFG4 579 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 KISS1RQ969F8 398 aaPredicted RBP6.53□□□□□ -1.36
COPS3-204ENST00000462236 OSBP2Q969R2 916 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 SIN3AQ96ST3 1273 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 IER2Q9BTL4 223 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 CARS2Q9HA77 564 aaKnown RBP6.53□□□□□ -1.36
COPS3-204ENST00000462236 PCMTD2Q9NV79 361 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 TNFRSF10DQ9UBN6 386 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 CEP290O15078 2479 aa6.53□□□□□ -1.36
COPS3-204ENST00000462236 WASHC2AQ641Q2 1341 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 AKAP11Q9UKA4 1901 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 SIPA1L3O60292 1781 aaPredicted RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 BCORQ6W2J9 1755 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 KIAA0100Q14667 2235 aaKnown RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 RBAK-RBAKDNI3L0D1 243 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 FGF10O15520 208 aaPredicted RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 PRODHO43272 600 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 CDC45O75419 566 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 TBC1D8O95759 1140 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 SNRPB2P08579 225 aaKnown RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 GSTM1P09488 218 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 RFC4P35249 363 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 KIR2DL1P43626 348 aaPredicted RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 KIR2DL2P43627 348 aaPredicted RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 CTCFP49711 727 aaPredicted RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 TCEA2Q15560 299 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 TAF7LQ5H9L4 462 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 SLC35F1Q5T1Q4 408 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 C16orf86Q6ZW13 317 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 ABHD8Q96I13 439 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 ALPK1Q96QP1 1244 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 MCMBPQ9BTE3 642 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 CARD11Q9BXL7 1154 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 PAK6Q9NQU5 681 aaPredicted RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 SRP68Q9UHB9 627 aaKnown RBP6.52□□□□□ -1.37
COPS3-204ENST00000462236 LTBP1Q14766 1721 aa6.52□□□□□ -1.37
COPS3-204ENST00000462236 STXBP3O00186 592 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 DLX3O60479 287 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 HSPA8P11142 646 aaKnown RBP6.51□□□□□ -1.37
COPS3-204ENST00000462236 IFNGR1P15260 489 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 RPL10P27635 214 aaKnown RBP6.51□□□□□ -1.37
COPS3-204ENST00000462236 GRIA2P42262 883 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 CRKLP46109 303 aaKnown RBP6.51□□□□□ -1.37
COPS3-204ENST00000462236 CHRNEQ04844 493 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 SCRN1Q12765 414 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 DPY19L1Q2PZI1 675 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 RSPO2Q6UXX9 243 aaPredicted RBP6.51□□□□□ -1.37
COPS3-204ENST00000462236 NPLOC4Q8TAT6 608 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 LINC01599Q8WXQ3 324 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 C1orf159Q96HA4 380 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 PTCHD1Q96NR3 888 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 MMP19Q99542 508 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 ZFYVE21Q9BQ24 234 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 CDADC1Q9BWV3 514 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 MRPL4Q9BYD3 311 aaKnown RBP6.51□□□□□ -1.37
COPS3-204ENST00000462236 TMEM59LQ9UK28 342 aa6.51□□□□□ -1.37
COPS3-204ENST00000462236 MRPS23Q9Y3D9 190 aaKnown RBP6.51□□□□□ -1.37
COPS3-204ENST00000462236 MRC1P22897 1456 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 CARMIL3Q8ND23 1372 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 ESYT3A0FGR9 886 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 RFPL3O75679 317 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 PAMP19021 973 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 KCNJ6P48051 423 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 LBX1P52954 281 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 KCNAB2Q13303 367 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 HLA-DQA1Q5Y7H0 255 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 NFXL1Q6ZNB6 911 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 MAMDC2Q7Z304 686 aaPredicted RBP6.5□□□□□ -1.37
COPS3-204ENST00000462236 SPPL2CQ8IUH8 684 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 ANKS4BQ8N8V4 417 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 TMEM145Q8NBT3 493 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 KREMEN2Q8NCW0 462 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 PI4K2BQ8TCG2 481 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 DCAF4Q8WV16 495 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 MAP6Q96JE9 813 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 EXOC2Q96KP1 924 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms