RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 TCF7P36402 384 aaPredicted RBP12.51□□□□□ -0.41
CBX3-205ENST00000462165 NDUFV1P49821 464 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 SP4Q02446 784 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 TROAPQ12815 778 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 TRDNQ13061 729 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 GRIK4Q16099 956 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 B4GALNT3Q6L9W6 998 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 TSHZ1Q6ZSZ6 1077 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 NLRX1Q86UT6 975 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 CHD1LQ86WJ1 897 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 CRIPAKQ8N1N5 446 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 PPP2R3CQ969Q6 453 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 IL25Q9H293 177 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 TUBE1Q9UJT0 475 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 CDY2AQ9Y6F7 541 aa12.51□□□□□ -0.41
CBX3-205ENST00000462165 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 MEIS2O14770 477 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
CBX3-205ENST00000462165 GABBR2O75899 941 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 NUCB1Q02818 461 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 PPFIA1Q13136 1202 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 PKN1Q16512 942 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 CMTR2Q8IYT2 770 aaKnown RBP12.5□□□□□ -0.41
CBX3-205ENST00000462165 EFHBQ8N7U6 833 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 PRSS33Q8NF86 280 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 SPPL3Q8TCT6 385 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 DNAJB3Q8WWF6 145 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 SEPT1Q8WYJ6 367 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 GPRASP2Q96D09 838 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 ERAP1Q9NZ08 941 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 MRPL42Q9Y6G3 142 aaKnown RBP12.5□□□□□ -0.41
CBX3-205ENST00000462165 SQORQ9Y6N5 450 aa12.5□□□□□ -0.41
CBX3-205ENST00000462165 FNDC1Q4ZHG4 1894 aaPredicted RBP12.49□□□□□ -0.41
CBX3-205ENST00000462165 GSTTP1A0A1W2PQM5 241 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 ERICH2A1L162 156 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 TMEM221A6NGB7 291 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 LOC730098B7Z3J9 87 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 M0R296 226 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 ATP9AO75110 1047 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 CSPG5O95196 566 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 RPLP2P05387 115 aaKnown RBP12.49□□□□□ -0.41
CBX3-205ENST00000462165 ITGB1P05556 798 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 KCNA2P16389 499 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 DNAJB1P25685 340 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 COASYQ13057 564 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 AAMPQ13685 434 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 CBX2Q14781 532 aaPredicted RBP12.49□□□□□ -0.41
CBX3-205ENST00000462165 WTAPQ15007 396 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 MARCH8Q5T0T0 291 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 USP17L6PQ6QN14 398 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 TRIM67Q6ZTA4 783 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 ADGRD2Q7Z7M1 963 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 RTN4RL1Q86UN2 441 aaPredicted RBP12.49□□□□□ -0.41
CBX3-205ENST00000462165 SMRP1Q8NCR6 262 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 SMARCC2Q8TAQ2 1214 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 CUL5Q93034 780 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 CDHR1Q96JP9 859 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 PHOX2BQ99453 314 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 PRRX2Q99811 253 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 FTHL17Q9BXU8 183 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 RWDD1Q9H446 243 aaPredicted RBP12.49□□□□□ -0.41
CBX3-205ENST00000462165 AGO3Q9H9G7 860 aaKnown RBP12.49□□□□□ -0.41
CBX3-205ENST00000462165 CLEC1BQ9P126 229 aa12.49□□□□□ -0.41
CBX3-205ENST00000462165 CYP21A2P08686 494 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 MARK3P27448 753 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 CD52P31358 61 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 PTPN5P54829 565 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 MRPS6P82932 125 aaKnown RBP12.48□□□□□ -0.41
CBX3-205ENST00000462165 ZXDAP98168 799 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 IER5LQ5T953 404 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 IER5Q5VY09 327 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 NPAS4Q8IUM7 802 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 KLHL23Q8NBE8 558 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 POF1BQ8WVV4 589 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 PBXIP1Q96AQ6 731 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 SPZ1Q9BXG8 430 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 SMARCAD1Q9H4L7 1026 aa12.48□□□□□ -0.41
CBX3-205ENST00000462165 MYO15AQ9UKN7 3530 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 RRN3P2A6NIE6 340 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 GLP2RO95838 553 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 STAG3L1P0CL83 205 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 SART3Q15020 963 aaKnown RBP12.47□□□□□ -0.41
CBX3-205ENST00000462165 CATIPQ7Z7H3 387 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 GLG1Q92896 1179 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 MAP3K14Q99558 947 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 TRPV2Q9Y5S1 764 aa12.47□□□□□ -0.41
CBX3-205ENST00000462165 IGSF9BQ9UPX0 1349 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 IGHDP01880 384 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 INSRRP14616 1297 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 ITGB5P18084 799 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 SMARCA1P28370 1054 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 NRIP1P48552 1158 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 IGBP1P78318 339 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 TCF15Q12870 199 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 PAN2Q504Q3 1202 aaKnown RBP12.46□□□□□ -0.41
CBX3-205ENST00000462165 RALYLQ86SE5 291 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms