RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CCT2P78371 535 aaKnown RBP21.59■■□□□ 1.05
VARS-220ENST00000461874 TOB2Q14106 344 aaPredicted RBP21.59■■□□□ 1.05
VARS-220ENST00000461874 MARCH8Q5T0T0 291 aa21.59■■□□□ 1.05
VARS-220ENST00000461874 ARNTL2Q8WYA1 636 aa21.59■■□□□ 1.05
VARS-220ENST00000461874 RNF26Q9BY78 433 aaPredicted RBP21.59■■□□□ 1.05
VARS-220ENST00000461874 TM6SF1Q9BZW5 370 aa21.59■■□□□ 1.05
VARS-220ENST00000461874 TUBE1Q9UJT0 475 aa21.59■■□□□ 1.05
VARS-220ENST00000461874 CYP46A1Q9Y6A2 500 aa21.59■■□□□ 1.05
VARS-220ENST00000461874 FAM86B1E9PN63 330 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 PPFIA3O75145 1194 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 ATG7O95352 703 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 CHRNA1P02708 482 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 AMHP03971 560 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 FAM86B2P0C5J1 330 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 GNA11P29992 359 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 PLPPR4Q7Z2D5 763 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 SPRED2Q7Z698 418 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 REXO1Q8N1G1 1221 aaKnown RBP21.58■■□□□ 1.05
VARS-220ENST00000461874 SLC26A6Q9BXS9 759 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 NCOA5Q9HCD5 579 aaKnown RBP21.58■■□□□ 1.05
VARS-220ENST00000461874 PPP4R2Q9NY27 417 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 TTC28Q96AY4 2481 aa21.58■■□□□ 1.05
VARS-220ENST00000461874 IGLV3-22A0A075B6J6 115 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 RRN3P2A6NIE6 340 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 INSRRP14616 1297 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 STAT5BP51692 787 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 FAM117BQ6P1L5 589 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 RSPH3Q86UC2 560 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 PLA2G4DQ86XP0 818 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 MTCH2Q9Y6C9 303 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 PTPRSQ13332 1948 aa21.57■■□□□ 1.04
VARS-220ENST00000461874 DHX15O43143 795 aaKnown RBP21.56■■□□□ 1.04
VARS-220ENST00000461874 CCNE2O96020 404 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 IGBP1P78318 339 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 PLCB4Q15147 1175 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 MYOCDQ8IZQ8 938 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 CCDC148Q8NFR7 591 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 BICD2Q8TD16 824 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 APBB2Q92870 758 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 TNPO1Q92973 898 aaKnown RBP21.56■■□□□ 1.04
VARS-220ENST00000461874 ZNF274Q96GC6 653 aaPredicted RBP21.56■■□□□ 1.04
VARS-220ENST00000461874 INSL6Q9Y581 213 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 TRANK1O15050 2925 aa21.56■■□□□ 1.04
VARS-220ENST00000461874 KAT6AQ92794 2004 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 PRRC2BQ5JSZ5 2229 aaKnown RBP21.55■■□□□ 1.04
VARS-220ENST00000461874 IGKV6D-21A0A0A0MT36 114 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 GTPBP6O43824 516 aaPredicted RBP21.55■■□□□ 1.04
VARS-220ENST00000461874 MGAT3Q09327 533 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 ERICH6BQ5W0A0 696 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 ABHD15Q6UXT9 468 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 MICALL1Q8N3F8 863 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 RASGRP4Q8TDF6 673 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 DNAJB3Q8WWF6 145 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 IFIH1Q9BYX4 1025 aaKnown RBP21.55■■□□□ 1.04
VARS-220ENST00000461874 UPF3BQ9BZI7 483 aaKnown RBP21.55■■□□□ 1.04
VARS-220ENST00000461874 VPS54Q9P1Q0 977 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 TRPC6Q9Y210 931 aa21.55■■□□□ 1.04
VARS-220ENST00000461874 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.54■■□□□ 1.04
VARS-220ENST00000461874 LINC01553A4QN01 128 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 DDX39AO00148 427 aaKnown RBP21.54■■□□□ 1.04
VARS-220ENST00000461874 IPO5O00410 1097 aaKnown RBP21.54■■□□□ 1.04
VARS-220ENST00000461874 SLC26A2P50443 739 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 ERVK-21P61565 698 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 HTRA4P83105 476 aaPredicted RBP21.54■■□□□ 1.04
VARS-220ENST00000461874 GRB10Q13322 594 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 TJAP1Q5JTD0 557 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 ATXN2LQ8WWM7 1075 aaKnown RBP21.54■■□□□ 1.04
VARS-220ENST00000461874 TOP1MTQ969P6 601 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 ZBTB10Q96DT7 871 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 SH3GLB2Q9NR46 395 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 THEGQ9P2T0 379 aa21.54■■□□□ 1.04
VARS-220ENST00000461874 POTEB3A0JP26 581 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 LPXNO60711 386 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 RPLP2P05387 115 aaKnown RBP21.53■■□□□ 1.04
VARS-220ENST00000461874 GHRP10912 638 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 CIITAP33076 1130 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 SETQ01105 290 aaPredicted RBP21.53■■□□□ 1.04
VARS-220ENST00000461874 LPIN1Q14693 890 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 POTEBQ6S5H4 581 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 TRIM22Q8IYM9 498 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 UIMC1Q96RL1 719 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 TGS1Q96RS0 853 aaKnown RBP21.53■■□□□ 1.04
VARS-220ENST00000461874 LARP6Q9BRS8 491 aaKnown RBP21.53■■□□□ 1.04
VARS-220ENST00000461874 ZNF577Q9BSK1 485 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 TBC1D22BQ9NU19 505 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 PCDHA2Q9Y5H9 948 aa21.53■■□□□ 1.04
VARS-220ENST00000461874 SPTBN5Q9NRC6 3674 aaKnown RBP21.52■■□□□ 1.04
VARS-220ENST00000461874 BACH1O14867 736 aa21.52■■□□□ 1.04
VARS-220ENST00000461874 MRPS6P82932 125 aaKnown RBP21.52■■□□□ 1.04
VARS-220ENST00000461874 SSRP1Q08945 709 aaKnown RBP21.52■■□□□ 1.04
VARS-220ENST00000461874 FAM160B1Q5W0V3 765 aa21.52■■□□□ 1.04
VARS-220ENST00000461874 KRT40Q6A162 431 aa21.52■■□□□ 1.04
VARS-220ENST00000461874 SP7Q8TDD2 431 aaPredicted RBP21.52■■□□□ 1.04
VARS-220ENST00000461874 TRAPPC12Q8WVT3 735 aa21.52■■□□□ 1.04
VARS-220ENST00000461874 SYMPKQ92797 1274 aaKnown RBP21.52■■□□□ 1.04
VARS-220ENST00000461874 FAM49AQ9H0Q0 323 aaPredicted RBP21.52■■□□□ 1.04
VARS-220ENST00000461874 PDRG1Q9NUG6 133 aa21.52■■□□□ 1.04
VARS-220ENST00000461874 CDY2AQ9Y6F7 541 aa21.52■■□□□ 1.04
VARS-220ENST00000461874 MICAL3Q7RTP6 2002 aa21.51■■□□□ 1.03
VARS-220ENST00000461874 CPLX1O14810 134 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms