RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 PDIA5Q14554 519 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 EPHA7Q15375 998 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 UGCGQ16739 394 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 ATL3Q6DD88 541 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 NCAPH2Q6IBW4 605 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 DTHD1Q6ZMT9 781 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 PLPPR4Q7Z2D5 763 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 NECAB2Q7Z6G3 386 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 SLC43A3Q8NBI5 491 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 PPP1R13LQ8WUF5 828 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 GLT1D1Q96MS3 346 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 SMARCAD1Q9H4L7 1026 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 C11orf49Q9H6J7 331 aa12.69□□□□□ -0.38
SSBP1-202ENST00000461433 FBXO2Q9UK22 296 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-202ENST00000461433 ZNF862O60290 1169 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 STBD1O95210 358 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 MARCKSP29966 332 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-202ENST00000461433 PSEN2P49810 448 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 CDK7P50613 346 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 STAT5BP51692 787 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 MFSD10Q14728 455 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 KIAA0753Q2KHM9 967 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 NBPF20Q3BBV1 942 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 SLC39A5Q6ZMH5 540 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 HSD17B14Q9BPX1 270 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 STARD7Q9NQZ5 370 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 ZNF302Q9NR11 478 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 CHMP5Q9NZZ3 219 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 WRAP73Q9P2S5 460 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-202ENST00000461433 GABBR1Q9UBS5 961 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 TCEAL9Q9UHQ7 104 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 IGSF9BQ9UPX0 1349 aa12.68□□□□□ -0.38
SSBP1-202ENST00000461433 VWA3AA6NCI4 1184 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 SLITRK3O94933 977 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 YEATS4O95619 227 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 ITGA7Q13683 1181 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 SNX17Q15036 470 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 BANK1Q8NDB2 785 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 GLG1Q92896 1179 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 EIF2AK1Q9BQI3 630 aaKnown RBP12.67□□□□□ -0.38
SSBP1-202ENST00000461433 ERAP1Q9NZ08 941 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 RGL1Q9NZL6 768 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 RCOR1Q9UKL0 485 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 CFAP45Q9UL16 551 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 SRPRBQ9Y5M8 271 aaKnown RBP12.67□□□□□ -0.38
SSBP1-202ENST00000461433 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-202ENST00000461433 A0A0U1RQG5 324 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-202ENST00000461433 PP2D1A8MPX8 630 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 BACH1O14867 736 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 SPTLC2O15270 562 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 SPATA31C1P0DKV0 1188 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 MARK3P27448 753 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 CDC25AP30304 524 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-202ENST00000461433 HIC1Q14526 733 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 PLCB4Q15147 1175 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 TMEM266Q2M3C6 531 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 C1orf53Q5VUE5 145 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 FAM160B1Q5W0V3 765 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 PDXDC2PQ6P474 469 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 VTI1AQ96AJ9 217 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 DYDC2Q96IM9 177 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 MMTAG2Q9BU76 263 aaKnown RBP12.67□□□□□ -0.38
SSBP1-202ENST00000461433 KATNAL1Q9BW62 490 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 AZI2Q9H6S1 392 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 LRWD1Q9UFC0 647 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 ZNF215Q9UL58 517 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-202ENST00000461433 ATP6V1DQ9Y5K8 247 aa12.67□□□□□ -0.38
SSBP1-202ENST00000461433 ARVCFO00192 962 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 PPP6R2O75170 966 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 MED24O75448 989 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 P4HBP07237 508 aaKnown RBP12.66□□□□□ -0.38
SSBP1-202ENST00000461433 HOXC8P31273 242 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 QARSP47897 775 aaKnown RBP12.66□□□□□ -0.38
SSBP1-202ENST00000461433 SLC26A2P50443 739 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 PSMC5P62195 406 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 CTTNQ14247 550 aaKnown RBP12.66□□□□□ -0.38
SSBP1-202ENST00000461433 STK38Q15208 465 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 LRRC26Q2I0M4 334 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 NFRKBQ6P4R8 1299 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 SESTD1Q86VW0 696 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 CATSPER3Q86XQ3 398 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 CLIC6Q96NY7 704 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
SSBP1-202ENST00000461433 CSRNP2Q9H175 543 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 HDAC6Q9UBN7 1215 aa12.66□□□□□ -0.38
SSBP1-202ENST00000461433 KAT6AQ92794 2004 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 ZBTB42B2RXF5 422 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 SMIM10L2AP0DMW4 78 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 SMIM10L2BP0DMW5 78 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 RPA1P27694 616 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 CHMP4BP1P59074 171 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 KRT85P78386 507 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 ADAM17P78536 824 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 CYP4A11Q02928 519 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 ECM1Q16610 540 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 LEO1Q8WVC0 666 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-202ENST00000461433 CTAGE1Q96RT6 745 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 LXNQ9BS40 222 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms