RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 HOXD13P35453 343 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 CYLC1P35663 651 aaPredicted RBP22.34■■□□□ 1.17
CCM2-203ENST00000461377 ZNF569Q5MCW4 686 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
CCM2-203ENST00000461377 SYTL5Q8TDW5 730 aaPredicted RBP22.34■■□□□ 1.17
CCM2-203ENST00000461377 MMRN2Q9H8L6 949 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 OLFML3Q9NRN5 406 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 FAM207AQ9NSI2 230 aaPredicted RBP22.34■■□□□ 1.17
CCM2-203ENST00000461377 CGNQ9P2M7 1197 aaKnown RBP22.34■■□□□ 1.17
CCM2-203ENST00000461377 CETN3O15182 167 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 HERVK_113P62684 666 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 SPP2Q13103 211 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 ADAM9Q13443 819 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 PCNX4Q63HM2 1172 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 NACC1Q96RE7 527 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 CARD6Q9BX69 1037 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 EDEM3Q9BZQ6 932 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 NHEJ1Q9H9Q4 299 aaPredicted RBP22.34■■□□□ 1.17
CCM2-203ENST00000461377 WRAP73Q9P2S5 460 aaPredicted RBP22.34■■□□□ 1.17
CCM2-203ENST00000461377 PLAGL2Q9UPG8 496 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 UBIAD1Q9Y5Z9 338 aa22.34■■□□□ 1.17
CCM2-203ENST00000461377 PDXKO00764 312 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 ZBED4O75132 1171 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 FDX1P10109 184 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 ERCC3P19447 782 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 KRT83P78385 493 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 KCNMA1Q12791 1236 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 ANGEL2Q5VTE6 544 aaKnown RBP22.33■■□□□ 1.17
CCM2-203ENST00000461377 ZNF662Q6ZS27 426 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 MNS1Q8NEH6 495 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 NEK9Q8TD19 979 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 AS3MTQ9HBK9 375 aa22.33■■□□□ 1.17
CCM2-203ENST00000461377 EIF3CLB5ME19 914 aaKnown RBP22.32■■□□□ 1.16
CCM2-203ENST00000461377 TADA3O75528 432 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 PRPF6O94906 941 aaKnown RBP22.32■■□□□ 1.16
CCM2-203ENST00000461377 BACE1P56817 501 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 SLC35F6Q8N357 371 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 NLGN2Q8NFZ4 835 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 EIF3CQ99613 913 aaKnown RBP22.32■■□□□ 1.16
CCM2-203ENST00000461377 KCNH7Q9NS40 1196 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 FAM184BQ9ULE4 1060 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 CALUO43852 315 aaPredicted RBP22.32■■□□□ 1.16
CCM2-203ENST00000461377 PTPRAP18433 802 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 NR2F2P24468 414 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 ERCC6LQ2NKX8 1250 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 ARHGAP27Q6ZUM4 889 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 CCDC155Q8N6L0 562 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 SMCR8Q8TEV9 937 aaPredicted RBP22.32■■□□□ 1.16
CCM2-203ENST00000461377 BAP1Q92560 729 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 WRNIP1Q96S55 665 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 HAUS4Q9H6D7 363 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 BCAS3Q9H6U6 928 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 HOMER2Q9NSB8 354 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 KCND2Q9NZV8 630 aa22.32■■□□□ 1.16
CCM2-203ENST00000461377 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.32■■□□□ 1.16
CCM2-203ENST00000461377 ZBTB39O15060 712 aa22.31■■□□□ 1.16
CCM2-203ENST00000461377 FAM13AO94988 1023 aa22.31■■□□□ 1.16
CCM2-203ENST00000461377 MRPS9P82933 396 aaKnown RBP22.31■■□□□ 1.16
CCM2-203ENST00000461377 TKFCQ3LXA3 575 aa22.31■■□□□ 1.16
CCM2-203ENST00000461377 ZNF280CQ8ND82 737 aa22.31■■□□□ 1.16
CCM2-203ENST00000461377 NEK11Q8NG66 645 aa22.31■■□□□ 1.16
CCM2-203ENST00000461377 TRPM4Q8TD43 1214 aa22.31■■□□□ 1.16
CCM2-203ENST00000461377 ZKSCAN4Q969J2 545 aaPredicted RBP22.31■■□□□ 1.16
CCM2-203ENST00000461377 LXNQ9BS40 222 aa22.31■■□□□ 1.16
CCM2-203ENST00000461377 AGO4Q9HCK5 861 aaKnown RBP22.31■■□□□ 1.16
CCM2-203ENST00000461377 JADE2Q9NQC1 790 aa22.31■■□□□ 1.16
CCM2-203ENST00000461377 TYW1Q9NV66 732 aaKnown RBP22.31■■□□□ 1.16
CCM2-203ENST00000461377 CTDP1Q9Y5B0 961 aaPredicted RBP22.31■■□□□ 1.16
CCM2-203ENST00000461377 VWA5AO00534 786 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 DHX15O43143 795 aaKnown RBP22.3■■□□□ 1.16
CCM2-203ENST00000461377 GCNT3O95395 438 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 RPS6P62753 249 aaKnown RBP22.3■■□□□ 1.16
CCM2-203ENST00000461377 PPP2R3AQ06190 1150 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 C12orf42Q96LP6 360 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 PICK1Q9NRD5 415 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 ASTN1O14525 1302 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 EFCAB8A8MWE9 144 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 EIF3DO15371 548 aaKnown RBP eCLIP22.3■■□□□ 1.16
CCM2-203ENST00000461377 ZNF131P52739 623 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 FRMD5Q7Z6J6 570 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 ATG4CQ96DT6 458 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 TRERF1Q96PN7 1200 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 TAAR1Q96RJ0 339 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 POLD4Q9HCU8 107 aa22.3■■□□□ 1.16
CCM2-203ENST00000461377 ITGB3BPQ13352 177 aaPredicted RBP22.29■■□□□ 1.16
CCM2-203ENST00000461377 PRAMEF18Q5VWM3 479 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 PDXDC1Q6P996 788 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 MIER3Q7Z3K6 550 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 PARVGQ9HBI0 331 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 GPRC5DQ9NZD1 345 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 SEL1LQ9UBV2 794 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 ODF2LQ9ULJ1 636 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 CTAGE9A4FU28 777 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 LRRC53A6NM62 1247 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 DDX39AO00148 427 aaKnown RBP22.29■■□□□ 1.16
CCM2-203ENST00000461377 TUBB2AQ13885 445 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 PGM5Q15124 567 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 RRAGAQ7L523 313 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 MYCT1Q8N699 235 aa22.29■■□□□ 1.16
CCM2-203ENST00000461377 BANK1Q8NDB2 785 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms