RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 LDHDQ86WU2 507 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 TMEM130Q8N3G9 435 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 KCT2Q8NC54 265 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 ZNF384Q8TF68 577 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 MYOZ2Q9NPC6 264 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 FANCLQ9NW38 375 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 ZMYM5Q9UJ78 669 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 MYO3BQ8WXR4 1341 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 UBOX5O94941 541 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 HMGB1P09429 215 aaKnown RBP9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 PRDX5P30044 214 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 CHMP4BP1P59074 171 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 C1QTNF8P60827 252 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 NBPF9Q3BBW0 867 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 C2orf27AQ580R0 203 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 PRAMEF13Q5VWM6 474 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 KIAA1211LQ6NV74 962 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 SHISA2Q6UWI4 295 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 PNMA8AQ86V59 439 aaPredicted RBP9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 TMEM192Q8IY95 271 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 C16orf71Q8IYS4 520 aaPredicted RBP9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 PHACTR4Q8IZ21 702 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 C12orf50Q8NA57 414 aaPredicted RBP9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 ZNF512BQ96KM6 892 aaPredicted RBP9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 KIF2CQ99661 725 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 TMEM260Q9NX78 707 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 DENND2AQ9ULE3 1009 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 PDS5AQ29RF7 1337 aaKnown RBP9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 SALL1Q9NSC2 1324 aa9.73□□□□□ -0.85
ECHDC1-212ENST00000461239 AKAP11Q9UKA4 1901 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 ESYT3A0FGR9 886 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 PIK3R2O00459 728 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 WNT10BO00744 389 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 SUSD5O60279 629 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 FRAT2O75474 233 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 CST3P01034 146 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 SLC7A5Q01650 507 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 ANKRD34AQ69YU3 496 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 FDX2Q6P4F2 183 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 CDC37L1Q7L3B6 337 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 EEPD1Q7L9B9 569 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 PPFIBP1Q86W92 1011 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 SPATA5Q8NB90 893 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 OTUD7AQ8TE49 926 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 THAP3Q8WTV1 239 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 TBC1D22AQ8WUA7 517 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 PRMT6Q96LA8 375 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 SLC6A18Q96N87 628 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 LRRCC1Q9C099 1032 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 GNL3LQ9NVN8 582 aaKnown RBP9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 SCAF8Q9UPN6 1271 aaKnown RBP9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 PASKQ96RG2 1323 aa9.72□□□□□ -0.85
ECHDC1-212ENST00000461239 CDC45O75419 566 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 ASPAP45381 313 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 PMS1P54277 932 aaKnown RBP9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 FSTL1Q12841 308 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 GRIK4Q16099 956 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 SLC10A6Q3KNW5 377 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 GNPTABQ3T906 1256 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 CFAP100Q494V2 611 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 SMC5Q8IY18 1101 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 CNTROBQ8N137 903 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 CLASRPQ8N2M8 674 aaKnown RBP9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 SMC1BQ8NDV3 1235 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 WDR66Q8TBY9 1149 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 CYB5D2Q8WUJ1 264 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 CCDC74BQ96LY2 380 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 PIDD1Q9HB75 910 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 SALL3Q9BXA9 1300 aa9.71□□□□□ -0.86
ECHDC1-212ENST00000461239 PCNTO95613 3336 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 TRAF5O00463 557 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 UQCRFS1P1P0C7P4 283 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 PREPP48147 710 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 MMP14P50281 582 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 SSRP1Q08945 709 aaKnown RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 PRRT3Q5FWE3 981 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 CCDC158Q5M9N0 1113 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 TTC39AQ5SRH9 613 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 GORABQ5T7V8 394 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 TSHZ3Q63HK5 1081 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 APOBEC3HQ6NTF7 200 aaKnown RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 Q6ZS46 218 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 SMYD4Q8IYR2 804 aaPredicted RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 BAHD1Q8TBE0 780 aaPredicted RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 APPBP2Q92624 585 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 EDC3Q96F86 508 aaKnown RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 MRIQ9BWK5 157 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 GLIS2Q9BZE0 524 aaPredicted RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 PIH1D3Q9NQM4 214 aaKnown RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 GGA3Q9NZ52 723 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 NOP53Q9NZM5 478 aaKnown RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 SUCOQ9UBS9 1254 aaKnown RBP9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 SUGT1Q9Y2Z0 365 aa9.7□□□□□ -0.86
ECHDC1-212ENST00000461239 ADM5C9JUS6 153 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 RNGTTO60942 597 aaKnown RBP9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 CLSTN1O94985 981 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 ALX3O95076 343 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 IFIT2P09913 472 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms