RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 RRP36Q96EU6 259 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 C11orf84Q9BUA3 381 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 RC3H2Q9HBD1 1191 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 PXMP2Q9NR77 195 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 MUTYHQ9UIF7 546 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 CYP46A1Q9Y6A2 500 aa15.69■□□□□ 0.1
SCAMP4-206ENST00000460767 RGS20O76081 388 aa15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 TGFB3P10600 412 aa15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 HYAL1Q12794 435 aa15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 HSDL1Q3SXM5 330 aa15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 CELF3Q5SZQ8 465 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 ARHGEF16Q5VV41 709 aa15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 RNF135Q8IUD6 432 aa15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 CLP1Q92989 425 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 KIF2CQ99661 725 aa15.68■□□□□ 0.1
SCAMP4-206ENST00000460767 C17orf102A2RUQ5 167 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 GOLGA8AA7E2F4 631 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 GOLGA8BA8MQT2 603 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 TBX10O75333 385 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 EYA4O95677 639 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 MMP1P03956 469 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 FAM26DQ5JW98 314 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 SYNE3Q6ZMZ3 975 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 ZNF274Q96GC6 653 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 IFIH1Q9BYX4 1025 aaKnown RBP15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 ADGRA3Q8IWK6 1321 aa15.67■□□□□ 0.1
SCAMP4-206ENST00000460767 CFBP00751 764 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 EIF2AK2P19525 551 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 CTNNB1P35222 781 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 BMPR1AP36894 532 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.14e-7■■□□□ 12
SCAMP4-206ENST00000460767 FOXK2Q01167 660 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 DLX2Q07687 328 aaPredicted RBP15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 CBX2Q14781 532 aaPredicted RBP15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 WWC2Q6AWC2 1192 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 TRIM67Q6ZTA4 783 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 VSIG10LQ86VR7 867 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 FIBCD1Q8N539 461 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 ATP6V0A1Q93050 837 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 MSLNLQ96KJ4 702 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 SPATA33Q96N06 139 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 PHOX2BQ99453 314 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 PDCD2LQ9BRP1 358 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 PLVAPQ9BX97 442 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 CD207Q9UJ71 328 aa15.66■□□□□ 0.1
SCAMP4-206ENST00000460767 CCDC196A0A1B0GTZ2 297 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 hCG_1642624A0A1W2PR95 340 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 H3BRB1 525 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 GCOM1H8Y6P7 765 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 hCG_1984214I3L0E3 225 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 GGPS1O95749 300 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 POLR2MP0CAP2 368 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 IFNAR1P17181 557 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 UBA1P22314 1058 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 HOXA13P31271 388 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 ADAM17P78536 824 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 TCF15Q12870 199 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 PPP1R18Q6NYC8 613 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 EP400NLQ6ZTU2 488 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 ZNF713Q8N859 430 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 IL31RAQ8NI17 732 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 P2RX5Q93086 422 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 TUT1Q9H6E5 874 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 ALG13Q9NP73 1137 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 BARHL2Q9NY43 387 aa15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-206ENST00000460767 TMEM221A6NGB7 291 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 LOC730098B7Z3J9 87 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 M0R296 226 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 STXBP3O00186 592 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 GRM6O15303 877 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 TREHO43280 583 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 PRPF3O43395 683 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 LGALS2P05162 132 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 SMIM10L2AP0DMW4 78 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 SMIM10L2BP0DMW5 78 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 GNAT1P11488 350 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 RBM25P49756 843 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 ADAM15Q13444 863 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 PFKFB3Q16875 520 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 CCDC82Q8N4S0 544 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 SMRP1Q8NCR6 262 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 ZNF689Q96CS4 500 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 RNF26Q9BY78 433 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 IRF2BPLQ9H1B7 796 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 RNPEPQ9H4A4 650 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 PDRG1Q9NUG6 133 aa15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 V9GY48 417 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-206ENST00000460767 UPP2O95045 317 aa15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 MRPS9P82933 396 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 COASYQ13057 564 aa15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 PGM5Q15124 567 aa15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 NAALADL2Q58DX5 795 aa15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 USP17L6PQ6QN14 398 aa15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 SUGP1Q8IWZ8 645 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 FBXL6Q8N531 539 aa15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 PIBF1Q8WXW3 757 aa15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 GPKOWQ92917 476 aaPredicted RBP eCLIP15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 PPP2R3CQ969Q6 453 aa15.63■□□□□ 0.09
SCAMP4-206ENST00000460767 OSBPL7Q9BZF2 842 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms