RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 FOXP2O15409 715 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 MYBL2P10244 700 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 CCND1P24385 295 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 CD40P25942 277 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 SDHAP31040 664 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 SCAND1P57086 179 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 ERVK-21P61565 698 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 MCL1Q07820 350 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 PTPN21Q16825 1174 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 PAN2Q504Q3 1202 aaKnown RBP7.35□□□□□ -1.23
CCDC50-203ENST00000460064 GPR158Q5T848 1215 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 ZBTB46Q86UZ6 589 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 PDGFDQ9GZP0 370 aaPredicted RBP7.35□□□□□ -1.23
CCDC50-203ENST00000460064 SLC6A17Q9H1V8 727 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 MS4A5Q9H3V2 200 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 TOPORSQ9NS56 1045 aaPredicted RBP7.35□□□□□ -1.23
CCDC50-203ENST00000460064 KLHL14Q9P2G3 628 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 WASHC2AQ641Q2 1341 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 OR14I1A6ND48 311 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 K7ESF4 209 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 MAPKAPK2P49137 400 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 RAB27AP51159 221 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 TMEM62Q0P6H9 643 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 KLF1Q13351 362 aaPredicted RBP7.34□□□□□ -1.23
CCDC50-203ENST00000460064 LRRC32Q14392 662 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 ABCB5Q2M3G0 1257 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 ZC3H14Q6PJT7 736 aaKnown RBP7.34□□□□□ -1.23
CCDC50-203ENST00000460064 FRMD7Q6ZUT3 714 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 NOL8Q76FK4 1167 aaKnown RBP7.34□□□□□ -1.23
CCDC50-203ENST00000460064 CMIPQ8IY22 773 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 RTF1Q92541 710 aaKnown RBP7.34□□□□□ -1.23
CCDC50-203ENST00000460064 ERCC4Q92889 916 aaPredicted RBP7.34□□□□□ -1.23
CCDC50-203ENST00000460064 ZDHHC5Q9C0B5 715 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 BCAS3Q9H6U6 928 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 ZMAT4Q9H898 229 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 KCNG1Q9UIX4 513 aa7.34□□□□□ -1.23
CCDC50-203ENST00000460064 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.33□□□□□ -1.24
CCDC50-203ENST00000460064 LCHNA4D1U4 455 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 FAHP16930 419 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 FNTBP49356 437 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 ADCY1Q08828 1119 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 NFE2Q16621 373 aaPredicted RBP7.33□□□□□ -1.24
CCDC50-203ENST00000460064 CATSPEREQ5SY80 951 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 ESRP1Q6NXG1 681 aaKnown RBP7.33□□□□□ -1.24
CCDC50-203ENST00000460064 PGM2L1Q6PCE3 622 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 ATG4DQ86TL0 474 aaPredicted RBP7.33□□□□□ -1.24
CCDC50-203ENST00000460064 CBARPQ8N350 705 aaPredicted RBP7.33□□□□□ -1.24
CCDC50-203ENST00000460064 TTLL11Q8NHH1 800 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 CHMP4CQ96CF2 233 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 HOOK2Q96ED9 719 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 TSPAN17Q96FV3 270 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 FUBP3Q96I24 572 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC50-203ENST00000460064 C16orf92Q96LL3 132 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 GBP4Q96PP9 640 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 MSRAQ9UJ68 235 aa7.33□□□□□ -1.24
CCDC50-203ENST00000460064 SHTN1A0MZ66 631 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 RASSF10A6NK89 507 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 ABLIM1O14639 778 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 MT-CO1P00395 513 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 MMEP08473 750 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 IARSP41252 1262 aaKnown RBP7.32□□□□□ -1.24
CCDC50-203ENST00000460064 HERVK_113P62684 666 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 INAVAQ3KP66 663 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 ARTNQ5T4W7 220 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 NME9Q86XW9 330 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 TOE1Q96GM8 510 aaKnown RBP7.32□□□□□ -1.24
CCDC50-203ENST00000460064 DTLQ9NZJ0 730 aa7.32□□□□□ -1.24
CCDC50-203ENST00000460064 BIN1O00499 593 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 AKAP10O43572 662 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 KDM1AO60341 852 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 CFBP00751 764 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 GLI1P08151 1106 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 PDCD1Q15116 288 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 PPP2R5AQ15172 486 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 EPHA7Q15375 998 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 KCNMB1Q16558 191 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 PLEKHN1Q494U1 663 aaPredicted RBP7.31□□□□□ -1.24
CCDC50-203ENST00000460064 HSP90AB2PQ58FF8 381 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 HIPK4Q8NE63 616 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 ASB15Q8WXK1 588 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 ALG3Q92685 438 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 TSR2Q969E8 191 aaKnown RBP7.31□□□□□ -1.24
CCDC50-203ENST00000460064 ZNF496Q96IT1 587 aaPredicted RBP7.31□□□□□ -1.24
CCDC50-203ENST00000460064 FAXDC2Q96IV6 333 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 MKS1Q9NXB0 559 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 ZIM2Q9NZV7 527 aa7.31□□□□□ -1.24
CCDC50-203ENST00000460064 E2F8A0AVK6 867 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 PRAMEF22A3QJZ6 481 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 GOLGA6L22H0YM25 854 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 LRG1P02750 347 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 TMEM253P0C7T8 217 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 YBX1P67809 324 aaKnown RBP7.3□□□□□ -1.24
CCDC50-203ENST00000460064 DBPQ10586 325 aaPredicted RBP7.3□□□□□ -1.24
CCDC50-203ENST00000460064 PRAMEF18Q5VWM3 479 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 ETV3LQ6ZN32 361 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 AMIGO3Q86WK7 504 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 LMBR1Q8WVP7 490 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 DDX11Q96FC9 970 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 TUBGCP5Q96RT8 1024 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 ZFP64Q9NPA5 681 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms