RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PKN1Q16512 942 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 UTP14CQ5TAP6 766 aaKnown RBP11.4□□□□□ -0.58
HDLBP-228ENST00000459788 GALNT17Q6IS24 598 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 CPLX2Q6PUV4 134 aaKnown RBP11.4□□□□□ -0.58
HDLBP-228ENST00000459788 TRIM22Q8IYM9 498 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 USP38Q8NB14 1042 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 GLG1Q92896 1179 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 WNT8BQ93098 351 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 PRDM12Q9H4Q4 367 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 AGO4Q9HCK5 861 aaKnown RBP11.4□□□□□ -0.58
HDLBP-228ENST00000459788 SETD4Q9NVD3 440 aa11.4□□□□□ -0.58
HDLBP-228ENST00000459788 NAP1L2Q9ULW6 460 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-228ENST00000459788 COL1A2P08123 1366 aa11.4□□□□□ -0.59
HDLBP-228ENST00000459788 SORBS3O60504 671 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 ZNF76P36508 570 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 USP11P51784 963 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 ACTR2P61160 394 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 TAP1Q03518 808 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 GRIK4Q16099 956 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 FAM160B1Q5W0V3 765 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 TRIM50Q86XT4 487 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 SMAP1Q8IYB5 467 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-228ENST00000459788 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 NME8Q8N427 588 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 ATXN2LQ8WWM7 1075 aaKnown RBP11.39□□□□□ -0.59
HDLBP-228ENST00000459788 IL17RAQ96F46 866 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 SAMD11Q96NU1 681 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 ZBED2Q9BTP6 218 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-228ENST00000459788 TUBE1Q9UJT0 475 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 INSL6Q9Y581 213 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 COL4A4P53420 1690 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-228ENST00000459788 BDP1A6H8Y1 2624 aa11.39□□□□□ -0.59
HDLBP-228ENST00000459788 IGLV3-22A0A075B6J6 115 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-228ENST00000459788 CDKL5O76039 1030 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 DEXIO95424 95 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 ARP10275 920 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 CPA1P15085 419 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 STAT5BP51692 787 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 HTRA4P83105 476 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-228ENST00000459788 KRT76Q01546 638 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 TOB2Q14106 344 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-228ENST00000459788 ADGRE1Q14246 886 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 IER5Q5VY09 327 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 ZNF746Q6NUN9 644 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-228ENST00000459788 ABHD15Q6UXT9 468 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 PLA2G4DQ86XP0 818 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 DBF4BQ8NFT6 615 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-228ENST00000459788 PCDHA2Q9Y5H9 948 aa11.38□□□□□ -0.59
HDLBP-228ENST00000459788 KDM3AQ9Y4C1 1321 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 FAM86B1E9PN63 330 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 IPO5O00410 1097 aaKnown RBP11.37□□□□□ -0.59
HDLBP-228ENST00000459788 CPLX1O14810 134 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 DHX15O43143 795 aaKnown RBP11.37□□□□□ -0.59
HDLBP-228ENST00000459788 HBP1O60381 514 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 FAM86B2P0C5J1 330 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 MYOGP15173 224 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 ERVK-21P61565 698 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 SP4Q02446 784 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 SSRP1Q08945 709 aaKnown RBP11.37□□□□□ -0.59
HDLBP-228ENST00000459788 MGAT3Q09327 533 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 ITGB3BPQ13352 177 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-228ENST00000459788 ANKRD1Q15327 319 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 MARCH8Q5T0T0 291 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 JAKMIP3Q5VZ66 844 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 MIS18BP1Q6P0N0 1132 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 MOXD1Q6UVY6 613 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 DAGLBQ8NCG7 672 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 CYP2W1Q8TAV3 490 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 TGS1Q96RS0 853 aaKnown RBP11.37□□□□□ -0.59
HDLBP-228ENST00000459788 PCYT2Q99447 389 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 FTHL17Q9BXU8 183 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 IFIH1Q9BYX4 1025 aaKnown RBP11.37□□□□□ -0.59
HDLBP-228ENST00000459788 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-228ENST00000459788 TCEAL9Q9UHQ7 104 aa11.37□□□□□ -0.59
HDLBP-228ENST00000459788 SMIM35A0A1B0GVV1 85 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 POTEB3A0JP26 581 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 CHRNA1P02708 482 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 INSRRP14616 1297 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 DEFB103AP81534 67 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 MRPS6P82932 125 aaKnown RBP11.36□□□□□ -0.59
HDLBP-228ENST00000459788 PLCB4Q15147 1175 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 AAK1Q2M2I8 961 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 TJAP1Q5JTD0 557 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 ZNF484Q5JVG2 852 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 ODR4Q5SWX8 454 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 POTEBQ6S5H4 581 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 TSHZ1Q6ZSZ6 1077 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 RDM1Q8NG50 284 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 ATP8B4Q8TF62 1192 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 PHKBQ93100 1093 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 FAM167AQ96KS9 214 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 RIT2Q99578 217 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 ZNF577Q9BSK1 485 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 SLC26A6Q9BXS9 759 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 PDRG1Q9NUG6 133 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 TMEM260Q9NX78 707 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms