RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TBC1D22BQ9NU19 505 aa18.31■□□□□ 0.52
COL7A1-203ENST00000459756 YBX2Q9Y2T7 364 aaKnown RBP18.31■□□□□ 0.52
COL7A1-203ENST00000459756 RRN3P2A6NIE6 340 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 DHX15O43143 795 aaKnown RBP18.3■□□□□ 0.52
COL7A1-203ENST00000459756 CCNE2O96020 404 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 KCNJ6P48051 423 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 STAT5BP51692 787 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 RABGGTBP53611 331 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 IKBKEQ14164 716 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 GRIN2CQ14957 1233 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 PRR16Q569H4 304 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 RPAINQ86UA6 219 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 MYLIPQ8WY64 445 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 AIFM3Q96NN9 605 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 NKX2-4Q9H2Z4 354 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 TUBE1Q9UJT0 475 aa18.3■□□□□ 0.52
COL7A1-203ENST00000459756 IGKV6D-21A0A0A0MT36 114 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 MBLAC1A4D2B0 266 aaPredicted RBP18.29■□□□□ 0.52
COL7A1-203ENST00000459756 DDX39AO00148 427 aaKnown RBP18.29■□□□□ 0.52
COL7A1-203ENST00000459756 NEK4P51957 841 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 WDR5P61964 334 aaKnown RBP18.29■□□□□ 0.52
COL7A1-203ENST00000459756 FAM26DQ5JW98 314 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 FAM160B1Q5W0V3 765 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 MIS18BP1Q6P0N0 1132 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 ABHD15Q6UXT9 468 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 HERC6Q8IVU3 1022 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 BLIDQ8IZY5 108 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 LENG9Q96B70 501 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 TCEAL9Q9UHQ7 104 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 TRPC6Q9Y210 931 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 EYSQ5T1H1 3165 aa18.29■□□□□ 0.52
COL7A1-203ENST00000459756 KIF28PB7ZC32 967 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 M0R2N6 131 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 BACH1O14867 736 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 RPLP2P05387 115 aaKnown RBP18.28■□□□□ 0.52
COL7A1-203ENST00000459756 CTSHP09668 335 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 INSRRP14616 1297 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 FOSL2P15408 326 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 XBP1P17861 261 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 KRT76Q01546 638 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 PLCB4Q15147 1175 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 PLEKHG4Q58EX7 1191 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 MARCH8Q5T0T0 291 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 ZNF746Q6NUN9 644 aaPredicted RBP18.28■□□□□ 0.52
COL7A1-203ENST00000459756 RSPH3Q86UC2 560 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 SMAP1Q8IYB5 467 aaPredicted RBP18.28■□□□□ 0.52
COL7A1-203ENST00000459756 TBCKQ8TEA7 893 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 CHD7Q9P2D1 2997 aa18.28■□□□□ 0.52
COL7A1-203ENST00000459756 POTEB3A0JP26 581 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 MYOGP15173 224 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 IGBP1P78318 339 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 NPY5RQ15761 445 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 TCTN1Q2MV58 587 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 PPP2R2DQ66LE6 453 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 POTEBQ6S5H4 581 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 RUFY4Q6ZNE9 571 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 DBF4BQ8NFT6 615 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 WASF1Q92558 559 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 SEPT8Q92599 483 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 UIMC1Q96RL1 719 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 PHF20Q9BVI0 1012 aa18.27■□□□□ 0.52
COL7A1-203ENST00000459756 EDIL3O43854 480 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 CTDNEP1O95476 244 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 ME3Q16798 604 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 KRT25Q7Z3Z0 450 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 CCDC60Q8IWA6 550 aaPredicted RBP18.26■□□□□ 0.51
COL7A1-203ENST00000459756 NECAB1Q8N987 351 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 ATP8B4Q8TF62 1192 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 GTF3C6Q969F1 213 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 RIT2Q99578 217 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 ZNF302Q9NR11 478 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 ORC3Q9UBD5 711 aaPredicted RBP18.26■□□□□ 0.51
COL7A1-203ENST00000459756 KCNJ14Q9UNX9 436 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 PCDHA10Q9Y5I2 948 aa18.26■□□□□ 0.51
COL7A1-203ENST00000459756 CYP3A7-CYP3A51PA0A087WV96 503 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 MSH4O15457 936 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 CHRNA1P02708 482 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 CA3P07451 260 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 PSAPP07602 524 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 CYP3A7P24462 503 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 DEFB103AP81534 67 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 NONOQ15233 471 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL7A1-203ENST00000459756 Q4G0T1 1027 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 SWSAP1Q6NVH7 229 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 PDXDC2PQ6P474 469 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 SLC17A8Q8NDX2 589 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 MAFAQ8NHW3 353 aaPredicted RBP18.25■□□□□ 0.51
COL7A1-203ENST00000459756 DNAJB3Q8WWF6 145 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 APBB2Q92870 758 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 PRDM12Q9H4Q4 367 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 PCDHA2Q9Y5H9 948 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 PTPRSQ13332 1948 aa18.25■□□□□ 0.51
COL7A1-203ENST00000459756 WDR64B1ANS9 1081 aa18.24■□□□□ 0.51
COL7A1-203ENST00000459756 TLL1O43897 1013 aa18.24■□□□□ 0.51
COL7A1-203ENST00000459756 HBP1O60381 514 aa18.24■□□□□ 0.51
COL7A1-203ENST00000459756 LARGE1O95461 756 aa18.24■□□□□ 0.51
COL7A1-203ENST00000459756 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
COL7A1-203ENST00000459756 C8orf34Q49A92 452 aa18.24■□□□□ 0.51
COL7A1-203ENST00000459756 MOXD1Q6UVY6 613 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms