RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 DTNBO60941 627 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 TMCC1O94876 653 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 NDUFA10O95299 355 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 TFRCP02786 760 aaKnown RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 ATP1A1P05023 1023 aaKnown RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 GBP1P32455 592 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 PLCD1P51178 756 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 LACTBP83111 547 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 IFIT1BQ5T764 474 aaKnown RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 PNMA8AQ86V59 439 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 GSPT2Q8IYD1 628 aaKnown RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 DYDC1Q8WWB3 177 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 TEKT1Q969V4 418 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 MPHOSPH6Q99547 160 aaKnown RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 ZKSCAN3Q9BRR0 538 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 DBNDD1Q9H9R9 158 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 PLCB1Q9NQ66 1216 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 PCMTD2Q9NV79 361 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-214ENST00000458640 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
DDX39B-214ENST00000458640 TSPY2A6NKD2 308 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 KRT14P02533 472 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 CALM1P0DP23 149 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 CALM2P0DP24 149 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 CALM3P0DP25 149 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ACADSP16219 412 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ZFXP17010 805 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ZNF24P17028 368 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 TCP1P17987 556 aaKnown RBP12.38□□□□□ -0.43
DDX39B-214ENST00000458640 RTN1Q16799 776 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 SPRED3Q2MJR0 410 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 KBTBD12Q3ZCT8 623 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 SPATA1Q5VX52 437 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 RESP18Q5W5W9 173 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 KCTD16Q68DU8 428 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ANO7Q6IWH7 933 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 HHIPL2Q6UWX4 724 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 WASF1Q92558 559 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 C8orf76Q96K31 380 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 FGD4Q96M96 766 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 MTFR1LQ9H019 292 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 GDF3Q9NR23 364 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 PANK4Q9NVE7 773 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 GUCA1BQ9UMX6 200 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 CLIC4Q9Y696 253 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 FLT1P17948 1338 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 STK36Q9NRP7 1315 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 SRCAPQ6ZRS2 3230 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 PSME4Q14997 1843 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 TMEM221A6NGB7 291 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 GCOM1H8Y6P7 765 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-214ENST00000458640 PRDM1O75626 825 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ZMYND10O75800 440 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 MYZAPP0CAP1 466 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 SARSP49591 514 aaKnown RBP12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ERVK-24P63145 666 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 MORC3Q14149 939 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 IRGCQ6NXR0 463 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 APTXQ7Z2E3 356 aaKnown RBP12.38□□□□□ -0.43
DDX39B-214ENST00000458640 CATIPQ7Z7H3 387 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 MAPKAPK5Q8IW41 473 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 SH3TC2Q8TF17 1288 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 PPP2R3CQ969Q6 453 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 CCDC43Q96MW1 224 aaKnown RBP12.38□□□□□ -0.43
DDX39B-214ENST00000458640 UNC45AQ9H3U1 944 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 MKNK2Q9HBH9 465 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 UTP6Q9NYH9 597 aaKnown RBP12.38□□□□□ -0.43
DDX39B-214ENST00000458640 CTTNBP2NLQ9P2B4 639 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ZNF646O15015 1829 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-214ENST00000458640 ECM29Q5VYK3 1845 aa12.38□□□□□ -0.43
DDX39B-214ENST00000458640 A0A0U1RQJ8 604 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 USP17L3A6NCW0 530 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 USP17L4A6NCW7 530 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 EVI5O60447 810 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 HIP1RO75146 1068 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 DDAH1O94760 285 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 GYPCP04921 128 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 PARP1P09874 1014 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 DRD4P21917 467 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 IARSP41252 1262 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 RHBDL3P58872 404 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 TGFB2P61812 414 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 PPP2R2AP63151 447 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 SPAG1Q07617 926 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 ADAM9Q13443 819 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 CUL4BQ13620 913 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 SEC23AQ15436 765 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 CCDC92Q53HC0 331 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 USP17L1Q7RTZ2 530 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 METTL16Q86W50 562 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 RAB11FIP4Q86YS3 637 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 CERS5Q8N5B7 392 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms