RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CEP57L1Q8IYX8 460 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 AOPEPQ8N6M6 819 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 MORC4Q8TE76 937 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 PIGOQ8TEQ8 1089 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 GPRASP2Q96D09 838 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 PCYT2Q99447 389 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 RIT2Q99578 217 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 C7orf25Q9BPX7 421 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 TEKT3Q9BXF9 490 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 MROH8Q9H579 483 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 FBXO40Q9UH90 709 aa9.79□□□□□ -0.84
RIF1-208ENST00000457745 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.78□□□□□ -0.84
RIF1-208ENST00000457745 SNAI1O95863 264 aaPredicted RBP9.78□□□□□ -0.84
RIF1-208ENST00000457745 PLA2G4BP0C869 781 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 ATP4AP20648 1035 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 YY1P25490 414 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 RPA1P27694 616 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 ICAM3P32942 547 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 TM4SF4P48230 202 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 GCLCP48506 637 aaPredicted RBP9.78□□□□□ -0.84
RIF1-208ENST00000457745 PMS1P54277 932 aaKnown RBP9.78□□□□□ -0.84
RIF1-208ENST00000457745 EHHADHQ08426 723 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 KCTD2Q14681 263 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 EPHA7Q15375 998 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 CCL14Q16627 93 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 LY6KQ17RY6 165 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 TMEM92Q6UXU6 159 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 ARMCX2Q7L311 632 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 CCDC60Q8IWA6 550 aaPredicted RBP9.78□□□□□ -0.84
RIF1-208ENST00000457745 KIAA0895Q8NCT3 520 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 RASSF8Q8NHQ8 419 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 FAM200AQ8TCP9 573 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 TMC2Q8TDI7 906 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 LARP4BQ92615 738 aaKnown RBP9.78□□□□□ -0.84
RIF1-208ENST00000457745 SMARCE1Q969G3 411 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 LENG1Q96BZ8 264 aaPredicted RBP9.78□□□□□ -0.84
RIF1-208ENST00000457745 POLR3CQ9BUI4 534 aaPredicted RBP9.78□□□□□ -0.84
RIF1-208ENST00000457745 IKZF4Q9H2S9 585 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 CCDC39Q9UFE4 941 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 USP25Q9UHP3 1055 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 MAPK8IP1Q9UQF2 711 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 SYNGAP1Q96PV0 1343 aa9.78□□□□□ -0.84
RIF1-208ENST00000457745 GSTTP1A0A1W2PQM5 241 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 RASSF10A6NK89 507 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 IGHA2P01877 340 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 SSBP05455 408 aaKnown RBP eCLIP9.77□□□□□ -0.85
RIF1-208ENST00000457745 TXLNAP40222 546 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 ZNF165P49910 485 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 STK4Q13043 487 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 MAPK7Q13164 816 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 PTPN21Q16825 1174 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 MORN1Q5T089 497 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 PLA2G4FQ68DD2 849 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 TAPT1Q6NXT6 567 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 XRRA1Q6P2D8 792 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 CCDC62Q6P9F0 684 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 MIER3Q7Z3K6 550 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 PLEKHH3Q7Z736 793 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 GPBP1Q86WP2 473 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 TPH2Q8IWU9 490 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 DNERQ8NFT8 737 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 USP6NLQ92738 828 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 CALML4Q96GE6 196 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 CAPNS2Q96L46 248 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 LXNQ9BS40 222 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 STK17AQ9UEE5 414 aa9.77□□□□□ -0.85
RIF1-208ENST00000457745 TRIM49BA6NDI0 452 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 BACH1O14867 736 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 TLR2O60603 784 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 EIF3JO75822 258 aaKnown RBP9.76□□□□□ -0.85
RIF1-208ENST00000457745 FARP2O94887 1054 aaPredicted RBP9.76□□□□□ -0.85
RIF1-208ENST00000457745 ATP1A3P13637 1013 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 MRE11P49959 708 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 CASP5P51878 434 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 NPEPPSP55786 919 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 SOX10P56693 466 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 STX17P56962 302 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 ACTR2P61160 394 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 ASIC1P78348 528 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 PDE4DQ08499 809 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 COASYQ13057 564 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 GIT2Q14161 759 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 LRRC41Q15345 812 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 STXBP2Q15833 593 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 HSP90AA4PQ58FG1 418 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 PRAMEF19Q5SWL8 479 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 ABHD15Q6UXT9 468 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 CYFIP1Q7L576 1253 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 NLRX1Q86UT6 975 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 TRIM50Q86XT4 487 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 DAW1Q8N136 415 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 GTF3C2Q8WUA4 911 aaPredicted RBP9.76□□□□□ -0.85
RIF1-208ENST00000457745 DDX12PQ92771 950 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 HHIPL1Q96JK4 782 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 MAML3Q96JK9 1138 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 IWS1Q96ST2 819 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 REEP2Q9BRK0 252 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 BHMT2Q9H2M3 363 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 ANO10Q9NW15 660 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 TBC1D7Q9P0N9 293 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms