RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PTPDC1A2A3K4 754 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 TMEM247A6NEH6 219 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 LSM1O15116 133 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 TGFB3P10600 412 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 FDPSP14324 419 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ALOX15P16050 662 aaPredicted RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ALDH3A1P30838 453 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 NOVP48745 357 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 SCNN1DP51172 638 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 MRPS25P82663 173 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 PPFIA1Q13136 1202 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 CBX3Q13185 183 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 NTRK3Q16288 839 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 WHAMMP3Q1A5X7 153 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ADALQ6DHV7 355 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 SLC15A3Q8IY34 581 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 CCDC155Q8N6L0 562 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 SYT2Q8N9I0 419 aaPredicted RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 MTMR14Q8NCE2 650 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 TBC1D31Q96DN5 1066 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ZSCAN10Q96SZ4 725 aaPredicted RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 CCDC28BQ9BUN5 200 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 OSBPL5Q9H0X9 879 aaPredicted RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 DHX36Q9H2U1 1008 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 NCOA5Q9HCD5 579 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 GALNT8Q9NY28 637 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 SEPT10Q9P0V9 454 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ZFATQ9P243 1243 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 CTNNAL1Q9UBT7 734 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ATRNL1Q5VV63 1379 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 MYPNQ86TC9 1320 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 STK36Q9NRP7 1315 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 PSMD14O00487 310 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 SART1O43290 800 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ZBTB43O43298 467 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 PRDM1O75626 825 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 F13A1P00488 732 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 LINGO3P0C6S8 592 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 RASA1P20936 1047 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 S100A1P23297 94 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 CDC27P30260 824 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 KRT9P35527 623 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 METAP2P50579 478 aaKnown RBP eCLIP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 MRPS35P82673 323 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 AKAP17AQ02040 695 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 KIF5AQ12840 1032 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 XRCC4Q13426 336 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 SPIDRQ14159 915 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 SPCS2Q15005 226 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 PPP2R5BQ15173 497 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 NIM1KQ8IY84 436 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 LSMEM2Q8N112 164 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ARHGAP18Q8N392 663 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 AGBL3Q8NEM8 1001 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 MAIP1Q8WWC4 291 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 HVCN1Q96D96 273 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 ZBED3Q96IU2 234 aaPredicted RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 BPIFA3Q9BQP9 254 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 UBAC1Q9BSL1 405 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 EHD4Q9H223 541 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 PDE11AQ9HCR9 933 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 VCX3AQ9NNX9 186 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 USP40Q9NVE5 1235 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 STIM2Q9P246 746 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 HESX1Q9UBX0 185 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 CEP131Q9UPN4 1083 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 C15orf41Q9Y2V0 281 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 LUC7L2Q9Y383 392 aaKnown RBP7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 PCDHB2Q9Y5E7 798 aa7.48□□□□□ -1.21
CUBNP3-201ENST00000457461 CCDC69A6NI79 296 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 EIF3HO15372 352 aaKnown RBP eCLIP7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 AP5Z1O43299 807 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 RANBP6O60518 1105 aaKnown RBP7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 SMIM24O75264 130 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 DDAH1O94760 285 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 PRPF6O94906 941 aaKnown RBP7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 PARNO95453 639 aaKnown RBP7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 POLR3DP05423 398 aaPredicted RBP7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 PDGFRBP09619 1106 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 ATP4AP20648 1035 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 HOXD12P35452 270 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 CDK8P49336 464 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 ACADVLP49748 655 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 CLK1P49759 484 aaKnown RBP7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 SCNN1BP51168 640 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 IRAK1P51617 712 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 TROAPQ12815 778 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 NFIAQ12857 509 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 STIM1Q13586 685 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 SMUG1Q53HV7 270 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 CFAP157Q5JU67 520 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 NEPROQ6NW34 567 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 CYB5D1Q6P9G0 228 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 C3orf62Q6ZUJ4 267 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 METTL16Q86W50 562 aaKnown RBP7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 DGKHQ86XP1 1220 aa7.47□□□□□ -1.21
CUBNP3-201ENST00000457461 LURAP1LQ8IV03 231 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms