RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 PSEN2P49810 448 aa20.09■□□□□ 0.81
FAM239A-203ENST00000456563 SLC26A2P50443 739 aa20.09■□□□□ 0.81
FAM239A-203ENST00000456563 KRT85P78386 507 aa20.09■□□□□ 0.81
FAM239A-203ENST00000456563 STK38Q15208 465 aa20.09■□□□□ 0.81
FAM239A-203ENST00000456563 GLG1Q92896 1179 aa20.09■□□□□ 0.81
FAM239A-203ENST00000456563 SENP6Q9GZR1 1112 aaPredicted RBP20.09■□□□□ 0.81
FAM239A-203ENST00000456563 STARD7Q9NQZ5 370 aa20.09■□□□□ 0.81
FAM239A-203ENST00000456563 ERAP1Q9NZ08 941 aa20.09■□□□□ 0.81
FAM239A-203ENST00000456563 ZNF215Q9UL58 517 aaPredicted RBP20.09■□□□□ 0.81
FAM239A-203ENST00000456563 MAFBQ9Y5Q3 323 aaPredicted RBP20.09■□□□□ 0.81
FAM239A-203ENST00000456563 BRCA2P51587 3418 aa20.09■□□□□ 0.81
FAM239A-203ENST00000456563 MYH15Q9Y2K3 1946 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 PPP6R2O75170 966 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 P4HBP07237 508 aaKnown RBP20.08■□□□□ 0.81
FAM239A-203ENST00000456563 MFSD10Q14728 455 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 NEK9Q8TD19 979 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 SEZ6LQ9BYH1 1024 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 GABBR1Q9UBS5 961 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 LRWD1Q9UFC0 647 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 FBXO2Q9UK22 296 aaPredicted RBP20.08■□□□□ 0.81
FAM239A-203ENST00000456563 RCOR1Q9UKL0 485 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 SRPRBQ9Y5M8 271 aaKnown RBP20.08■□□□□ 0.81
FAM239A-203ENST00000456563 STK24Q9Y6E0 443 aa20.08■□□□□ 0.81
FAM239A-203ENST00000456563 GRIN2DO15399 1336 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 IGSF9BQ9UPX0 1349 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 A0A0U1RQG5 324 aaPredicted RBP20.07■□□□□ 0.8
FAM239A-203ENST00000456563 VWA3AA6NCI4 1184 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 SPTLC2O15270 562 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 MARCKSP29966 332 aaPredicted RBP20.07■□□□□ 0.8
FAM239A-203ENST00000456563 PSMC6P62333 389 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 ITGA7Q13683 1181 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 KIAA0753Q2KHM9 967 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 PDXDC2PQ6P474 469 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 SLC43A3Q8NBI5 491 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 ERMNQ8TAM6 284 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 ATP6V0A1Q93050 837 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 VTI1AQ96AJ9 217 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 AK8Q96MA6 479 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 HSD17B14Q9BPX1 270 aa20.07■□□□□ 0.8
FAM239A-203ENST00000456563 EIF2AK1Q9BQI3 630 aaKnown RBP20.07■□□□□ 0.8
FAM239A-203ENST00000456563 DKC1O60832 514 aaKnown RBP eCLIP20.06■□□□□ 0.8
FAM239A-203ENST00000456563 ATP4AP20648 1035 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 LONP1P36776 959 aaKnown RBP20.06■□□□□ 0.8
FAM239A-203ENST00000456563 QARSP47897 775 aaKnown RBP20.06■□□□□ 0.8
FAM239A-203ENST00000456563 PSMC5P62195 406 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 UGCGQ16739 394 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 NBPF20Q3BBV1 942 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 C1orf53Q5VUE5 145 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 NFRKBQ6P4R8 1299 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 SLC39A5Q6ZMH5 540 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 KCNG4Q8TDN1 519 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 DYDC2Q96IM9 177 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 CHAMP1Q96JM3 812 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 RNPEPQ9H4A4 650 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 RGL1Q9NZL6 768 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 SCN10AQ9Y5Y9 1956 aa20.06■□□□□ 0.8
FAM239A-203ENST00000456563 ZNF862O60290 1169 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 SLITRK3O94933 977 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 NCLP19338 710 aaKnown RBP20.05■□□□□ 0.8
FAM239A-203ENST00000456563 GRIN1Q05586 938 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 PTPN11Q06124 597 aaPredicted RBP20.05■□□□□ 0.8
FAM239A-203ENST00000456563 SNX17Q15036 470 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 PLCB4Q15147 1175 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 HAUS3Q68CZ6 603 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 SESTD1Q86VW0 696 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 KRI1Q8N9T8 703 aaKnown RBP20.05■□□□□ 0.8
FAM239A-203ENST00000456563 BANK1Q8NDB2 785 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 TNPO1Q92973 898 aaKnown RBP20.05■□□□□ 0.8
FAM239A-203ENST00000456563 POLR3CQ9BUI4 534 aaPredicted RBP20.05■□□□□ 0.8
FAM239A-203ENST00000456563 TUFT1Q9NNX1 390 aa20.05■□□□□ 0.8
FAM239A-203ENST00000456563 ARVCFO00192 962 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 SPATA31C1P0DKV0 1188 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 MUTP22033 750 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 MARK3P27448 753 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 RPA1P27694 616 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 CDK7P50613 346 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 CYP4A11Q02928 519 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 C4orf19Q8IY42 314 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 ATP8B4Q8TF62 1192 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 LEO1Q8WVC0 666 aaPredicted RBP20.04■□□□□ 0.8
FAM239A-203ENST00000456563 FAM167AQ96KS9 214 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 LXNQ9BS40 222 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 SCAND2PQ9GZW5 306 aaPredicted RBP20.04■□□□□ 0.8
FAM239A-203ENST00000456563 ZSWIM4Q9H7M6 989 aa20.04■□□□□ 0.8
FAM239A-203ENST00000456563 POTEB3A0JP26 581 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 PP2D1A8MPX8 630 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 HBP1O60381 514 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 STBD1O95210 358 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 LYPLA2O95372 231 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 CHMP4BP1P59074 171 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 PRKCEQ02156 737 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 CTTNQ14247 550 aaKnown RBP20.03■□□□□ 0.8
FAM239A-203ENST00000456563 KRT79Q5XKE5 535 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 POTEBQ6S5H4 581 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 CATSPER3Q86XQ3 398 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 TPH2Q8IWU9 490 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 CKAP2LQ8IYA6 745 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 C7orf31Q8N865 590 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 BBXQ8WY36 941 aaPredicted RBP20.03■□□□□ 0.8
FAM239A-203ENST00000456563 SPATA32Q96LK8 384 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms