RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 KIF5BP33176 963 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CAP2P40123 477 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 NLRP5P59047 1200 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 SP3Q02447 781 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 PAK2Q13177 524 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 FASTKD5Q7L8L6 764 aaKnown RBP11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 TAX1BP1Q86VP1 789 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 IFT20Q8IY31 132 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 ARFGAP2Q8N6H7 521 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 SPATA4Q8NEY3 305 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CCDC42Q96M95 316 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 ZKSCAN3Q9BRR0 538 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 NUCKS1Q9H1E3 243 aaKnown RBP11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 BLZF1Q9H2G9 400 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 LUC7LQ9NQ29 371 aaKnown RBP11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 INCENPQ9NQS7 918 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 TRIM10Q9UDY6 481 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 SAP30BPQ9UHR5 308 aaKnown RBP11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 PLAGL2Q9UPG8 496 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 ATP8B3O60423 1300 aa11.05□□□□□ -0.64
CHCHD4P3-201ENST00000455954 A0A0G2JLL6 359 aaPredicted RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 SSU72P8A0A1W2PR75 194 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CCDC85CA6NKD9 419 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 PDHXO00330 501 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 TLR2O60603 784 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 MYBL2P10244 700 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 TRIM21P19474 475 aaKnown RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 C2orf54Q08AI8 447 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 TBC1D8BQ0IIM8 1120 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 MAPK8IP2Q13387 824 aaPredicted RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 MOGSQ13724 837 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 RRP1BQ14684 758 aaKnown RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 IL17AQ16552 155 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CCDC178Q5BJE1 867 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 HAUS3Q68CZ6 603 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 LRIG3Q6UXM1 1119 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 DTHD1Q6ZMT9 781 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 PRRT2Q7Z6L0 340 aaPredicted RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CCDC84Q86UT8 332 aaPredicted RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 BLIDQ8IZY5 108 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 WHAMMQ8TF30 809 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CABS1Q96KC9 395 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CAPZA3Q96KX2 299 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CNOT6LQ96LI5 555 aaKnown RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 OSBPL9Q96SU4 736 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 DUSP9Q99956 384 aaKnown RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 C7orf25Q9BPX7 421 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CRNKL1Q9BZJ0 848 aaKnown RBP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 LACRTQ9GZZ8 138 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 GDF3Q9NR23 364 aa11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHCHD4P3-201ENST00000455954 FOCADQ5VW36 1801 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 TMCO5BA8MYB1 307 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 HMGB1P1B2RPK0 211 aaPredicted RBP11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 B4DLN1 442 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 RBAK-RBAKDNI3L0D1 243 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 WNT7AO00755 349 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 MEFVO15553 781 aaPredicted RBP11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 PRKAB2O43741 272 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 SRGAP2O75044 1071 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 PLEKHA8P1O95397 391 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 HNRNPH1P31943 449 aaKnown RBP11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 MTIF2P46199 727 aaKnown RBP11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 FNTAP49354 379 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 GNAQP50148 359 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 AMPD3Q01432 767 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 ARHGEF6Q15052 776 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CCDC181Q5TID7 509 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 GPAT2Q6NUI2 795 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 C8orf74Q6P047 294 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CNNM4Q6P4Q7 775 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 FBXO46Q6PJ61 603 aaPredicted RBP11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CSGALNACT2Q8N6G5 542 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 ZNF280CQ8ND82 737 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 SYN2Q92777 582 aaPredicted RBP11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 P3H4Q92791 437 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 EHD4Q9H223 541 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 DNAJC18Q9H819 358 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 ACTR5Q9H9F9 607 aaPredicted RBP11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 AS3MTQ9HBK9 375 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 GINM1Q9NU53 330 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 PCDHA4Q9UN74 947 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 PCDHA13Q9Y5I0 950 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 DOCK1Q14185 1865 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 CDK5RAP2Q96SN8 1893 aa11.03□□□□□ -0.64
CHCHD4P3-201ENST00000455954 RCCD1A6NED2 376 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 NDUFAB1O14561 156 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 ASNSP08243 561 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 SPP2Q13103 211 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 MAN2A1Q16706 1144 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 CCDC96Q2M329 555 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 SLC4A8Q2Y0W8 1093 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 CFAP221Q4G0U5 840 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 NAALADL2Q58DX5 795 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 TTMPQ5BVD1 217 aa11.02□□□□□ -0.65
CHCHD4P3-201ENST00000455954 MIIPQ5JXC2 388 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms