RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 COASYQ13057 564 aa26.8■■□□□ 1.88
PTPRA-208ENST00000455631 PAN2Q504Q3 1202 aaKnown RBP26.8■■□□□ 1.88
PTPRA-208ENST00000455631 CYB5R4Q7L1T6 521 aa26.8■■□□□ 1.88
PTPRA-208ENST00000455631 RBM23Q86U06 439 aaKnown RBP26.8■■□□□ 1.88
PTPRA-208ENST00000455631 FBXL6Q8N531 539 aa26.8■■□□□ 1.88
PTPRA-208ENST00000455631 KLHL23Q8NBE8 558 aa26.8■■□□□ 1.88
PTPRA-208ENST00000455631 SPPL3Q8TCT6 385 aa26.8■■□□□ 1.88
PTPRA-208ENST00000455631 LINC01599Q8WXQ3 324 aa26.8■■□□□ 1.88
PTPRA-208ENST00000455631 USP15Q9Y4E8 981 aaPredicted RBP26.8■■□□□ 1.88
PTPRA-208ENST00000455631 CYTH3O43739 400 aa26.79■■□□□ 1.88
PTPRA-208ENST00000455631 HDAC1Q13547 482 aaPredicted RBP26.79■■□□□ 1.88
PTPRA-208ENST00000455631 GRIK4Q16099 956 aa26.79■■□□□ 1.88
PTPRA-208ENST00000455631 NAALADL2Q58DX5 795 aa26.79■■□□□ 1.88
PTPRA-208ENST00000455631 POF1BQ8WVV4 589 aa26.79■■□□□ 1.88
PTPRA-208ENST00000455631 SENP7Q9BQF6 1050 aa26.79■■□□□ 1.88
PTPRA-208ENST00000455631 CD52P31358 61 aa26.78■■□□□ 1.88
PTPRA-208ENST00000455631 SMARCC2Q8TAQ2 1214 aa26.78■■□□□ 1.88
PTPRA-208ENST00000455631 PIBF1Q8WXW3 757 aa26.78■■□□□ 1.88
PTPRA-208ENST00000455631 AGO3Q9H9G7 860 aaKnown RBP26.78■■□□□ 1.88
PTPRA-208ENST00000455631 FAM86C1Q9NVL1 165 aa26.78■■□□□ 1.88
PTPRA-208ENST00000455631 PLXNA4Q9HCM2 1894 aa26.78■■□□□ 1.88
PTPRA-208ENST00000455631 GLP2RO95838 553 aa26.77■■□□□ 1.88
PTPRA-208ENST00000455631 MRPS6P82932 125 aaKnown RBP26.77■■□□□ 1.88
PTPRA-208ENST00000455631 CBX2Q14781 532 aaPredicted RBP26.77■■□□□ 1.88
PTPRA-208ENST00000455631 PCNX4Q63HM2 1172 aa26.77■■□□□ 1.88
PTPRA-208ENST00000455631 NLRX1Q86UT6 975 aa26.77■■□□□ 1.88
PTPRA-208ENST00000455631 NPAS4Q8IUM7 802 aa26.77■■□□□ 1.88
PTPRA-208ENST00000455631 GIMAP8Q8ND71 665 aaPredicted RBP26.77■■□□□ 1.88
PTPRA-208ENST00000455631 RPGRIP1Q96KN7 1286 aa26.77■■□□□ 1.88
PTPRA-208ENST00000455631 ERAP1Q9NZ08 941 aa26.77■■□□□ 1.88
PTPRA-208ENST00000455631 PCDHGC5Q9Y5F6 944 aa26.77■■□□□ 1.88
PTPRA-208ENST00000455631 GFRA3O60609 400 aa26.76■■□□□ 1.87
PTPRA-208ENST00000455631 IGBP1P78318 339 aa26.76■■□□□ 1.87
PTPRA-208ENST00000455631 SIGLEC14Q08ET2 396 aa26.76■■□□□ 1.87
PTPRA-208ENST00000455631 PHF7Q9BWX1 381 aaPredicted RBP26.76■■□□□ 1.87
PTPRA-208ENST00000455631 FAM49AQ9H0Q0 323 aaPredicted RBP26.76■■□□□ 1.87
PTPRA-208ENST00000455631 USP34Q70CQ2 3546 aa26.76■■□□□ 1.87
PTPRA-208ENST00000455631 MBLAC1A4D2B0 266 aaPredicted RBP26.75■■□□□ 1.87
PTPRA-208ENST00000455631 HIP1O00291 1037 aa26.75■■□□□ 1.87
PTPRA-208ENST00000455631 GLG1Q92896 1179 aa26.75■■□□□ 1.87
PTPRA-208ENST00000455631 CUL5Q93034 780 aa26.75■■□□□ 1.87
PTPRA-208ENST00000455631 FTHL17Q9BXU8 183 aa26.75■■□□□ 1.87
PTPRA-208ENST00000455631 ZDBF2Q9HCK1 2354 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 STAG3L1P0CL83 205 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 VCPP55072 806 aaKnown RBP26.74■■□□□ 1.87
PTPRA-208ENST00000455631 MARCH8Q5T0T0 291 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 B4GALNT3Q6L9W6 998 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 XRRA1Q6P2D8 792 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 USP17L6PQ6QN14 398 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 RTN4RL1Q86UN2 441 aaPredicted RBP26.74■■□□□ 1.87
PTPRA-208ENST00000455631 CRIPAKQ8N1N5 446 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 ZBTB10Q96DT7 871 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 TLE6Q9H808 572 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 LOXHD1Q8IVV2 1947 aa26.74■■□□□ 1.87
PTPRA-208ENST00000455631 M0QZ92 97 aa26.73■■□□□ 1.87
PTPRA-208ENST00000455631 PPFIA3O75145 1194 aa26.73■■□□□ 1.87
PTPRA-208ENST00000455631 IBSPP21815 317 aaPredicted RBP26.73■■□□□ 1.87
PTPRA-208ENST00000455631 GATMP50440 423 aa26.73■■□□□ 1.87
PTPRA-208ENST00000455631 TRDNQ13061 729 aa26.73■■□□□ 1.87
PTPRA-208ENST00000455631 IER5Q5VY09 327 aa26.73■■□□□ 1.87
PTPRA-208ENST00000455631 MICAL1Q8TDZ2 1067 aa26.73■■□□□ 1.87
PTPRA-208ENST00000455631 SEPT1Q8WYJ6 367 aa26.73■■□□□ 1.87
PTPRA-208ENST00000455631 SENP2Q9HC62 589 aa26.73■■□□□ 1.87
PTPRA-208ENST00000455631 GSTTP1A0A1W2PQM5 241 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 ERICH2A1L162 156 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 IFIT3O14879 490 aaKnown RBP26.72■■□□□ 1.87
PTPRA-208ENST00000455631 ATP9AO75110 1047 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 RPLP2P05387 115 aaKnown RBP26.72■■□□□ 1.87
PTPRA-208ENST00000455631 SCG2P13521 617 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 KCNA2P16389 499 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 TMEM62Q0P6H9 643 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 PLEKHM2Q8IWE5 1019 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 PKD2L1Q9P0L9 805 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 LRFN2Q9ULH4 789 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 TRPV2Q9Y5S1 764 aa26.72■■□□□ 1.87
PTPRA-208ENST00000455631 PER2O15055 1255 aa26.71■■□□□ 1.87
PTPRA-208ENST00000455631 RBM10P98175 930 aaKnown RBP26.71■■□□□ 1.87
PTPRA-208ENST00000455631 PAK2Q13177 524 aa26.71■■□□□ 1.87
PTPRA-208ENST00000455631 ATOH1Q92858 354 aaPredicted RBP26.71■■□□□ 1.87
PTPRA-208ENST00000455631 GPRASP2Q96D09 838 aa26.71■■□□□ 1.87
PTPRA-208ENST00000455631 ASIC4Q96FT7 647 aa26.71■■□□□ 1.87
PTPRA-208ENST00000455631 CDHR1Q96JP9 859 aa26.71■■□□□ 1.87
PTPRA-208ENST00000455631 SMARCAD1Q9H4L7 1026 aa26.71■■□□□ 1.87
PTPRA-208ENST00000455631 PADI3Q9ULW8 664 aa26.71■■□□□ 1.87
PTPRA-208ENST00000455631 TROAPQ12815 778 aa26.7■■□□□ 1.86
PTPRA-208ENST00000455631 OSBPL3Q9H4L5 887 aa26.7■■□□□ 1.86
PTPRA-208ENST00000455631 SQORQ9Y6N5 450 aa26.7■■□□□ 1.86
PTPRA-208ENST00000455631 MEIS2O14770 477 aa26.69■■□□□ 1.86
PTPRA-208ENST00000455631 ATF7P17544 494 aaPredicted RBP26.69■■□□□ 1.86
PTPRA-208ENST00000455631 WTAPQ15007 396 aa26.69■■□□□ 1.86
PTPRA-208ENST00000455631 SPOUT1Q5T280 376 aaKnown RBP26.69■■□□□ 1.86
PTPRA-208ENST00000455631 IRF2BPLQ9H1B7 796 aa26.69■■□□□ 1.86
PTPRA-208ENST00000455631 IL25Q9H293 177 aa26.69■■□□□ 1.86
PTPRA-208ENST00000455631 TLR9Q9NR96 1032 aa26.69■■□□□ 1.86
PTPRA-208ENST00000455631 IGSF9BQ9UPX0 1349 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 RRN3P2A6NIE6 340 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 PIK3CDO00329 1044 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 INSRRP14616 1297 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 AVPR2P30518 371 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 PTPN21Q16825 1174 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms