RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ANO3Q9BYT9 981 aa18.38■□□□□ 0.53
GPC1-206ENST00000455111 IFIH1Q9BYX4 1025 aaKnown RBP18.38■□□□□ 0.53
GPC1-206ENST00000455111 TSPYL2Q9H2G4 693 aaPredicted RBP18.38■□□□□ 0.53
GPC1-206ENST00000455111 COG5Q9UP83 839 aa18.38■□□□□ 0.53
GPC1-206ENST00000455111 KLF18A0A0U1RQI7 1052 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 SPDYE3A6NKU9 549 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 ZBTB43O43298 467 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 EDIL3O43854 480 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 GNAT1P11488 350 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 INSRRP14616 1297 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 ADD1P35611 737 aaKnown RBP18.37■□□□□ 0.53
GPC1-206ENST00000455111 PLCB4Q15147 1175 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 FBXO47Q5MNV8 452 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 FBXO22Q8NEZ5 403 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 CDHR1Q96JP9 859 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 AGO4Q9HCK5 861 aaKnown RBP18.37■□□□□ 0.53
GPC1-206ENST00000455111 ERAP1Q9NZ08 941 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 TUBE1Q9UJT0 475 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 CDY2AQ9Y6F7 541 aa18.37■□□□□ 0.53
GPC1-206ENST00000455111 FAM86B1E9PN63 330 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 MEIS1O00470 390 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 ENPP3O14638 875 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 DHX15O43143 795 aaKnown RBP18.36■□□□□ 0.53
GPC1-206ENST00000455111 NFASCO94856 1347 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 ATG7O95352 703 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 FAM86B2P0C5J1 330 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 NAPAP54920 295 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 ACTR2P61160 394 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 IGBP1P78318 339 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 PKN1Q16512 942 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.36■□□□□ 0.53
GPC1-206ENST00000455111 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 JPH1Q9HDC5 661 aaPredicted RBP18.36■□□□□ 0.53
GPC1-206ENST00000455111 RBM28Q9NW13 759 aaKnown RBP18.36■□□□□ 0.53
GPC1-206ENST00000455111 BARHL2Q9NY43 387 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 SLC9A2Q9UBY0 812 aa18.36■□□□□ 0.53
GPC1-206ENST00000455111 EVPLQ92817 2033 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 NID2Q14112 1375 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 IGLV3-22A0A075B6J6 115 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 IGKV6D-21A0A0A0MT36 114 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 SMCO2A6NFE2 343 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 H3BNC9 293 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 MAFGO15525 162 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 CDC45O75419 566 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 ATP4AP20648 1035 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 COL9A1P20849 921 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 SREBF1P36956 1147 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 APOBRQ0VD83 1088 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 PPP1R18Q6NYC8 613 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 TMEM192Q8IY95 271 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 APBB2Q92870 758 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 GLG1Q92896 1179 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 ZNF689Q96CS4 500 aaPredicted RBP18.35■□□□□ 0.53
GPC1-206ENST00000455111 UIMC1Q96RL1 719 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 EPHX3Q9H6B9 360 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 UBE2ZQ9H832 354 aaPredicted RBP18.35■□□□□ 0.53
GPC1-206ENST00000455111 PLXNA4Q9HCM2 1894 aa18.35■□□□□ 0.53
GPC1-206ENST00000455111 ADCY7P51828 1080 aa18.34■□□□□ 0.53
GPC1-206ENST00000455111 TMEM62Q0P6H9 643 aa18.34■□□□□ 0.53
GPC1-206ENST00000455111 CEP55Q53EZ4 464 aa18.34■□□□□ 0.53
GPC1-206ENST00000455111 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
GPC1-206ENST00000455111 TAF2Q6P1X5 1199 aa18.34■□□□□ 0.53
GPC1-206ENST00000455111 YME1L1Q96TA2 773 aa18.34■□□□□ 0.53
GPC1-206ENST00000455111 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
GPC1-206ENST00000455111 FNDC1Q4ZHG4 1894 aaPredicted RBP18.33■□□□□ 0.53
GPC1-206ENST00000455111 ZBTB42B2RXF5 422 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 PPFIA3O75145 1194 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 CD52P31358 61 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 MRPS6P82932 125 aaKnown RBP18.33■□□□□ 0.52
GPC1-206ENST00000455111 GPM6BQ13491 265 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 COL19A1Q14993 1142 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 PFKFB3Q16875 520 aaPredicted RBP18.33■□□□□ 0.52
GPC1-206ENST00000455111 AAK1Q2M2I8 961 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 JAKMIP3Q5VZ66 844 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 ABHD15Q6UXT9 468 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 Q6ZUG5 572 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 MRPL38Q96DV4 380 aaKnown RBP18.33■□□□□ 0.52
GPC1-206ENST00000455111 FAM49AQ9H0Q0 323 aaPredicted RBP18.33■□□□□ 0.52
GPC1-206ENST00000455111 TMX1Q9H3N1 280 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 CDHR5Q9HBB8 845 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 C11orf16Q9NQ32 467 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 NCOR1O75376 2440 aa18.33■□□□□ 0.52
GPC1-206ENST00000455111 IL9P15248 144 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 HSPA4P34932 840 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 CAMK1Q14012 370 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 NTRK3Q16288 839 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 SYNE3Q6ZMZ3 975 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 TSHZ1Q6ZSZ6 1077 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 PLPPR4Q7Z2D5 763 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 CCDC60Q8IWA6 550 aaPredicted RBP18.32■□□□□ 0.52
GPC1-206ENST00000455111 AGXT2Q9BYV1 514 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 PCDHA2Q9Y5H9 948 aa18.32■□□□□ 0.52
GPC1-206ENST00000455111 ADGRA3Q8IWK6 1321 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 C5orf67F2Z3F1 127 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 DDX39AO00148 427 aaKnown RBP18.31■□□□□ 0.52
GPC1-206ENST00000455111 GRM6O15303 877 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 STAT5BP51692 787 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 LEXMQ3ZCV2 418 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms