RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 C19orf67A6NJJ6 358 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 DDX39AO00148 427 aaKnown RBP6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MEIS2O14770 477 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ADAMTS3O15072 1205 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MBTPS2O43462 519 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PPFIA3O75145 1194 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GLP2RO95838 553 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MMP1P03956 469 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ITGB1P05556 798 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ICAM3P32942 547 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PBX3P40426 434 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MRPS6P82932 125 aaKnown RBP6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 NEDD9Q14511 834 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CTC1Q2NKJ3 1217 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FBXO47Q5MNV8 452 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MARCH8Q5T0T0 291 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TTC22Q5TAA0 569 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PCNX4Q63HM2 1172 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 HEATR3Q7Z4Q2 680 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RTN4RL1Q86UN2 441 aaPredicted RBP6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MICU3Q86XE3 530 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MB21D2Q8IYB1 491 aaPredicted RBP6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PRSS33Q8NF86 280 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 VN1R2Q8NFZ6 395 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GLG1Q92896 1179 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PCYT2Q99447 389 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 C11orf84Q9BUA3 381 aaPredicted RBP6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 APOL5Q9BWW9 433 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 USP26Q9BXU7 913 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 OSBPL3Q9H4L5 887 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CTNNA3Q9UI47 895 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TRPC6Q9Y210 931 aa6.9□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GVINP1Q7Z2Y8 2422 aa6.9□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FNDC1Q4ZHG4 1894 aaPredicted RBP6.9□□□□□ -1.31
HLA-DPA3-207ENST00000454398 DCHS1Q96JQ0 3298 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 GSTTP1A0A1W2PQM5 241 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ERICH2A1L162 156 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 STXBP3O00186 592 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 HIP1O00291 1037 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PER2O15055 1255 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PRC1O43663 620 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MGEA5O60502 916 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CAND2O75155 1236 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TGFB3P10600 412 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ALADP13716 330 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CHMLP26374 656 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 BMPR1AP36894 532 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NRIP1P48552 1158 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 APOBRQ0VD83 1088 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TRDNQ13061 729 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SMAD4Q13485 552 aaKnown RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MTMR1Q13613 665 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SMAD2Q15796 467 aaKnown RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FAM26DQ5JW98 314 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 IER5LQ5T953 404 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TYW1BQ6NUM6 668 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 KCNV1Q6PIU1 500 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TSHZ1Q6ZSZ6 1077 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TRMT1LQ7Z2T5 733 aaKnown RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CATIPQ7Z7H3 387 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SRBD1Q8N5C6 995 aaKnown RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 KLHL23Q8NBE8 558 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CYP2W1Q8TAV3 490 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TMEM40Q8WWA1 233 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 APBB2Q92870 758 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RRP36Q96EU6 259 aaKnown RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TCEANC2Q96MN5 208 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SAMD11Q96NU1 681 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TMX1Q9H3N1 280 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RWDD1Q9H446 243 aaPredicted RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 EHMT1Q9H9B1 1298 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CLEC1BQ9P126 229 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SEC63Q9UGP8 760 aaKnown RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CD207Q9UJ71 328 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 USP15Q9Y4E8 981 aaPredicted RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RBM8AQ9Y5S9 174 aaKnown RBP6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 WDR87Q6ZQQ6 2873 aa6.89□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PTPRZ1P23471 2315 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 EVPLQ92817 2033 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CNTNAP5Q8WYK1 1306 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NRCAMQ92823 1304 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MBLAC1A4D2B0 266 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 C5orf67F2Z3F1 127 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SH2B2O14492 632 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ENPP3O14638 875 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 DGKIO75912 1065 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 DDAH1O94760 285 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PDGFBP01127 241 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FGFR1P11362 822 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 GNAT1P11488 350 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 INSRRP14616 1297 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 VCPP55072 806 aaKnown RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PAK2Q13177 524 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ITGB3BPQ13352 177 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PLCB4Q15147 1175 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 WWC2Q6AWC2 1192 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 LLGL2Q6P1M3 1020 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TAF2Q6P1X5 1199 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms