RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 SV2CQ496J9 727 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 STK32CQ86UX6 486 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 FMNL3Q8IVF7 1028 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 SCUBE1Q8IWY4 988 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 ARHGEF39Q8N4T4 335 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 ZNF513Q8N8E2 541 aaPredicted RBP6.78□□□□□ -1.32
CUL3-208ENST00000454323 CEP89Q96ST8 783 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 APBA2Q99767 749 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 MRPL4Q9BYD3 311 aaKnown RBP6.78□□□□□ -1.32
CUL3-208ENST00000454323 SEC61A2Q9H9S3 476 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 ING1Q9UK53 422 aaPredicted RBP6.78□□□□□ -1.32
CUL3-208ENST00000454323 MAPRE3Q9UPY8 281 aa6.78□□□□□ -1.32
CUL3-208ENST00000454323 TRBV23-1A0A0A0MS06 115 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 PPFIA2O75334 1257 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 VAMP4O75379 141 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 THBDP07204 575 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 NAT2P11245 290 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 MCM7P33993 719 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 ADAM9Q13443 819 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 FOXE3Q13461 319 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 HSP90AA2PQ14568 343 aaPredicted RBP6.77□□□□□ -1.33
CUL3-208ENST00000454323 MIIPQ5JXC2 388 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 YOD1Q5VVQ6 348 aaPredicted RBP6.77□□□□□ -1.33
CUL3-208ENST00000454323 IQCEQ6IPM2 695 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 POMZP3Q6PJE2 187 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 AFAP1L2Q8N4X5 818 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 CDC6Q99741 560 aa6.77□□□□□ -1.33
CUL3-208ENST00000454323 AARSD1Q9BTE6 412 aaKnown RBP6.77□□□□□ -1.33
CUL3-208ENST00000454323 INTS7Q9NVH2 962 aaKnown RBP6.77□□□□□ -1.33
CUL3-208ENST00000454323 ALG1L2C9J202 215 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 C22orf46C9J442 243 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 EPHX1P07099 455 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 FGFR1P11362 822 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 SDSP20132 328 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 PPP2R2AP63151 447 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 UBR7Q8N806 425 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 TARS2Q9BW92 718 aaKnown RBP6.76□□□□□ -1.33
CUL3-208ENST00000454323 MCM8Q9UJA3 840 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 ZNF652Q9Y2D9 606 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 WASHC2CQ9Y4E1 1318 aa6.76□□□□□ -1.33
CUL3-208ENST00000454323 FAM83GA6ND36 823 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 NPIPB8E9PQR5 432 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 B4GALT4O60513 344 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 ITGAVP06756 1048 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 NFATC3Q12968 1075 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 LRRTM3Q86VH5 581 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 ZNF575Q86XF7 245 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 CERS3Q8IU89 383 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 Q8TCH9 128 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 CHFRQ96EP1 664 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 TOE1Q96GM8 510 aaKnown RBP6.75□□□□□ -1.33
CUL3-208ENST00000454323 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
CUL3-208ENST00000454323 WDR26Q9H7D7 661 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 COA3Q9Y2R0 106 aaPredicted RBP6.75□□□□□ -1.33
CUL3-208ENST00000454323 EID1Q9Y6B2 187 aa6.75□□□□□ -1.33
CUL3-208ENST00000454323 CCDC194A0A1B0GVG4 234 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 MYO1BO43795 1136 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 ZNF202O95125 648 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 EYA4O95677 639 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 MAP4K4O95819 1239 aaPredicted RBP6.74□□□□□ -1.33
CUL3-208ENST00000454323 STAT5AP42229 794 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 RPL11P62913 178 aaKnown RBP6.74□□□□□ -1.33
CUL3-208ENST00000454323 DPTQ07507 201 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 CR1LQ2VPA4 569 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 TRIM61Q5EBN2 209 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 CT47A1Q5JQC4 288 aaPredicted RBP6.74□□□□□ -1.33
CUL3-208ENST00000454323 RNF207Q6ZRF8 634 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 ZNF227Q86WZ6 799 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 RAVER1Q8IY67 606 aaKnown RBP6.74□□□□□ -1.33
CUL3-208ENST00000454323 IFNL2Q8IZJ0 200 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 OSBP2Q969R2 916 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 GEMIN8Q9NWZ8 242 aaKnown RBP6.74□□□□□ -1.33
CUL3-208ENST00000454323 DTLQ9NZJ0 730 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 MAGEC2Q9UBF1 373 aaPredicted RBP6.74□□□□□ -1.33
CUL3-208ENST00000454323 APEX2Q9UBZ4 518 aa6.74□□□□□ -1.33
CUL3-208ENST00000454323 PABPC1P11940 636 aaKnown RBP6.73□□□□□ -1.33
CUL3-208ENST00000454323 SUMO1P63165 101 aaKnown RBP6.73□□□□□ -1.33
CUL3-208ENST00000454323 RALYLQ86SE5 291 aaKnown RBP6.73□□□□□ -1.33
CUL3-208ENST00000454323 TEX2Q8IWB9 1127 aa6.73□□□□□ -1.33
CUL3-208ENST00000454323 WWC2-AS2Q96NR7 200 aa6.73□□□□□ -1.33
CUL3-208ENST00000454323 SYT3Q9BQG1 590 aa6.73□□□□□ -1.33
CUL3-208ENST00000454323 BTG4Q9NY30 223 aa6.73□□□□□ -1.33
CUL3-208ENST00000454323 CLEC1BQ9P126 229 aa6.73□□□□□ -1.33
CUL3-208ENST00000454323 LRP2BPQ9P2M1 347 aa6.73□□□□□ -1.33
CUL3-208ENST00000454323 CROTQ9UKG9 612 aa6.73□□□□□ -1.33
CUL3-208ENST00000454323 CUX2O14529 1486 aa6.73□□□□□ -1.33
CUL3-208ENST00000454323 PRODHO43272 600 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 C6orf222P0C671 652 aaPredicted RBP6.72□□□□□ -1.33
CUL3-208ENST00000454323 PLS3P13797 630 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 POU3F2P20265 443 aaPredicted RBP6.72□□□□□ -1.33
CUL3-208ENST00000454323 GRIA2P42262 883 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 NRN1LQ496H8 165 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 CNNM4Q6P4Q7 775 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 TRMT10BQ6PF06 316 aaKnown RBP6.72□□□□□ -1.33
CUL3-208ENST00000454323 NSMFQ6X4W1 530 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 STRA8Q7Z7C7 330 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 COPS5Q92905 334 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 MRGPRX3Q96LB0 322 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 C8orf48Q96LL4 319 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 FGD4Q96M96 766 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms