RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, human

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-213	ENST00000454132	TMEM59L	Q9UK28	342 aa		21.44	■■□□□ 1.02
LMBR1-213	ENST00000454132	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	21.44	■■□□□ 1.02
LMBR1-213	ENST00000454132	NEBL	O76041	1014 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	CAMTA2	O94983	1202 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	CHRM1	P11229	460 aa	Predicted RBP	21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	SLCO1A2	P46721	670 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	PEX26	Q7Z412	305 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	DAAM2	Q86T65	1068 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	TBC1D1	Q86TI0	1168 aa	Predicted RBP	21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	CADPS2	Q86UW7	1296 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	DAGLB	Q8NCG7	672 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	IQCD	Q96DY2	449 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	THOC1	Q96FV9	657 aa	Known RBP	21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	CCDC113	Q9H0I3	377 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	SRCAP	Q6ZRS2	3230 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	PALM3	A6NDB9	673 aa	Predicted RBP	21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	EIF4E1B	A6NMX2	242 aa	Known RBP	21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	UBE4A	Q14139	1066 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	FAM26F	Q5R3K3	315 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	KRT79	Q5XKE5	535 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	CLEC10A	Q8IUN9	316 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	SCFD2	Q8WU76	684 aa		21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	GPR101	Q96P66	508 aa	Predicted RBP	21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	SEC63	Q9UGP8	760 aa	Known RBP	21.43	■■□□□ 1.02
LMBR1-213	ENST00000454132	GBP2	P32456	591 aa	Predicted RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	PPP1R2	P41236	205 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	GNAQ	P50148	359 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	KCNH2	Q12809	1159 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	ADAM9	Q13443	819 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	HERC4	Q5GLZ8	1057 aa	Predicted RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	DCAF17	Q5H9S7	520 aa	Predicted RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	TCERG1L	Q5VWI1	586 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	RUFY4	Q6ZNE9	571 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	TATDN2	Q93075	761 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	ARAP2	Q8WZ64	1704 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	PGRMC1	O00264	195 aa	Known RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	EZR	P15311	586 aa	Known RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	HIBADH	P31937	336 aa	Known RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	ZNF211	Q13398	564 aa	Predicted RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	PPP2R5A	Q15172	486 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	TMC3	Q7Z5M5	1100 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	GLG1	Q92896	1179 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	BCAS3	Q9H6U6	928 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	ACTR5	Q9H9F9	607 aa	Predicted RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	AJAP1	Q9UKB5	411 aa	Predicted RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	MYH7B	A7E2Y1	1941 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	PVALEF	A0A1B0GWK0	134 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	DRD4	P21917	467 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	ALKBH5	Q6P6C2	394 aa	Known RBP	21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	RPAIN	Q86UA6	219 aa		21.42	■■□□□ 1.02
LMBR1-213	ENST00000454132	CASZ1	Q86V15	1759 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	USP17L5	A8MUK1	530 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	CHN1	P15882	459 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	USP11	P51784	963 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	WLS	Q5T9L3	541 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	SPTY2D1	Q68D10	685 aa	Predicted RBP	21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	LRIG3	Q6UXM1	1119 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	STAMBPL1	Q96FJ0	436 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	PSMD1	Q99460	953 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	OSGEP	Q9NPF4	335 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	CCDC87	Q9NVE4	849 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	CD2AP	Q9Y5K6	639 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	EDIL3	O43854	480 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	ABCB4	P21439	1286 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	GNA11	P29992	359 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	CUL1	Q13616	776 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	TMEM266	Q2M3C6	531 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	CCDC38	Q502W7	563 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	CCT6B	Q92526	530 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	NLRP3	Q96P20	1036 aa		21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	ELAC2	Q9BQ52	826 aa	Known RBP	21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132	GOLGB1	Q14789	3259 aa	Known RBP	21.41	■■□□□ 1.02
LMBR1-213	ENST00000454132		A0A1B0GUL6	1792 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	FGG	P02679	453 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	PLCB4	Q15147	1175 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	LLGL1	Q15334	1064 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	AADACL2	Q6P093	401 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	DNAJC19	Q96DA6	116 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	MTMR9	Q96QG7	549 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	LRP5	O75197	1615 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132		F8VZ95	297 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	ELF3	P78545	371 aa	Predicted RBP	21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	IFI35	P80217	286 aa	Predicted RBP	21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	RBM46	Q8TBY0	533 aa	Known RBP	21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	U2AF1L4	Q8WU68	220 aa	Known RBP	21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	21.4	■■□□□ 1.02	6e-7	■■□□□ 13.5
LMBR1-213	ENST00000454132	KIAA1024	Q9UPX6	916 aa		21.4	■■□□□ 1.02
LMBR1-213	ENST00000454132	MYO1E	Q12965	1108 aa		21.39	■■□□□ 1.02
LMBR1-213	ENST00000454132	IKZF4	Q9H2S9	585 aa		21.39	■■□□□ 1.02
LMBR1-213	ENST00000454132	NOD2	Q9HC29	1040 aa		21.39	■■□□□ 1.02
LMBR1-213	ENST00000454132	NAGPA	Q9UK23	515 aa		21.39	■■□□□ 1.02
LMBR1-213	ENST00000454132	SPDYE3	A6NKU9	549 aa		21.39	■■□□□ 1.01
LMBR1-213	ENST00000454132	KRT18	P05783	430 aa	Known RBP	21.39	■■□□□ 1.01
LMBR1-213	ENST00000454132	CASP5	P51878	434 aa		21.39	■■□□□ 1.01
LMBR1-213	ENST00000454132	BIRC3	Q13489	604 aa		21.39	■■□□□ 1.01
LMBR1-213	ENST00000454132	ZCWPW2	Q504Y3	356 aa		21.39	■■□□□ 1.01
LMBR1-213	ENST00000454132	IRF2BP2	Q7Z5L9	587 aa		21.39	■■□□□ 1.01
LMBR1-213	ENST00000454132	TPCN2	Q8NHX9	752 aa		21.39	■■□□□ 1.01
LMBR1-213	ENST00000454132	GAN	Q9H2C0	597 aa		21.39	■■□□□ 1.01
LMBR1-213	ENST00000454132	BUB1B	O60566	1050 aa	Predicted RBP	21.39	■■□□□ 1.01

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