RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 ATG7O95352 703 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 CTSHP09668 335 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 MARK3P27448 753 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 DEFB103AP81534 67 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 SSRP1Q08945 709 aaKnown RBP19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 IER5Q5VY09 327 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 USP38Q8NB14 1042 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 PGBD1Q96JS3 809 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 SLC26A6Q9BXS9 759 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 TMEM260Q9NX78 707 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 LMCD1Q9NZU5 365 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 SQORQ9Y6N5 450 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 PTPRSQ13332 1948 aa19.42■□□□□ 0.7
TNFRSF4-202ENST00000453580 IPO5O00410 1097 aaKnown RBP19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 CDKL5O76039 1030 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 ARP10275 920 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 ADGRE1Q14246 886 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 NTRK3Q16288 839 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 PKN1Q16512 942 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 MIS18BP1Q6P0N0 1132 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 NME8Q8N427 588 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 CYP2W1Q8TAV3 490 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 PPM1EQ8WY54 764 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 ARNTL2Q8WYA1 636 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 PHKBQ93100 1093 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 SAMD11Q96NU1 681 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 TGS1Q96RS0 853 aaKnown RBP19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 IFIH1Q9BYX4 1025 aaKnown RBP19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 THEGQ9P2T0 379 aa19.41■□□□□ 0.7
TNFRSF4-202ENST00000453580 BACH1O14867 736 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 DEXIO95424 95 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 INSRRP14616 1297 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 CCT2P78371 535 aaKnown RBP19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 AAK1Q2M2I8 961 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 TJAP1Q5JTD0 557 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 GALNT17Q6IS24 598 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 SMAP1Q8IYB5 467 aaPredicted RBP19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 MYOCDQ8IZQ8 938 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 IL27Q8NEV9 243 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 CRYGNQ8WXF5 182 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 ZNF577Q9BSK1 485 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 PDRG1Q9NUG6 133 aa19.4■□□□□ 0.7
TNFRSF4-202ENST00000453580 MYH9P35579 1960 aaKnown RBP19.39■□□□□ 0.7
TNFRSF4-202ENST00000453580 POTEB3A0JP26 581 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 HBP1O60381 514 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 USP11P51784 963 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 NLRP5P59047 1200 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 ANAPC15P60006 121 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 KRT76Q01546 638 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 ITGB3BPQ13352 177 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 ZNF746Q6NUN9 644 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 POTEBQ6S5H4 581 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 COL25A1Q9BXS0 654 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 TELO2Q9Y4R8 837 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 PCDHA2Q9Y5H9 948 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 COL1A2P08123 1366 aa19.39■□□□□ 0.69
TNFRSF4-202ENST00000453580 IGLV3-22A0A075B6J6 115 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 IGKV6D-21A0A0A0MT36 114 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 FAM86B1E9PN63 330 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 FAM86B2P0C5J1 330 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 XBP1P17861 261 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 CIITAP33076 1130 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 IGBP1P78318 339 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 MRPS5P82675 430 aaKnown RBP19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 MRPS6P82932 125 aaKnown RBP19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 TOB2Q14106 344 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 PLCB4Q15147 1175 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 ANKRD1Q15327 319 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 CCDC85BQ15834 202 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 ODR4Q5SWX8 454 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 DNAJB3Q8WWF6 145 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 TOP1MTQ969P6 601 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 PCYT2Q99447 389 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 FTHL17Q9BXU8 183 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 ZNF302Q9NR11 478 aa19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 RNF216Q9NWF9 866 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF4-202ENST00000453580 CHRNA1P02708 482 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 PSAPP07602 524 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 ERVK-21P61565 698 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 HTRA4P83105 476 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 MKRN4PQ13434 485 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 ZNF484Q5JVG2 852 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 MARCH8Q5T0T0 291 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 ABHD15Q6UXT9 468 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 TSHZ1Q6ZSZ6 1077 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 ATP8B4Q8TF62 1192 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 YME1L1Q96TA2 773 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 CERS4Q9HA82 394 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 CEP131Q9UPN4 1083 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 PCDHA10Q9Y5I2 948 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 MTCH2Q9Y6C9 303 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 SIP14410 1827 aa19.37■□□□□ 0.69
TNFRSF4-202ENST00000453580 SMIM35A0A1B0GVV1 85 aa19.36■□□□□ 0.69
TNFRSF4-202ENST00000453580 LINC01553A4QN01 128 aa19.36■□□□□ 0.69
TNFRSF4-202ENST00000453580 DDX39AO00148 427 aaKnown RBP19.36■□□□□ 0.69
TNFRSF4-202ENST00000453580 SKIV2LQ15477 1246 aaKnown RBP19.36■□□□□ 0.69
TNFRSF4-202ENST00000453580 TCTN1Q2MV58 587 aa19.36■□□□□ 0.69
TNFRSF4-202ENST00000453580 PRR16Q569H4 304 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms