RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 FAM86C1Q9NVL1 165 aa25.13■■□□□ 1.61
TNFRSF25-208ENST00000453341 USP15Q9Y4E8 981 aaPredicted RBP25.13■■□□□ 1.61
TNFRSF25-208ENST00000453341 NRIP1P48552 1158 aa25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 IMMTQ16891 758 aaKnown RBP25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 DIEXFQ68CQ4 756 aaKnown RBP25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 TSHZ1Q6ZSZ6 1077 aa25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 CYB5R4Q7L1T6 521 aa25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 RTN4RL1Q86UN2 441 aaPredicted RBP25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 KLHL23Q8NBE8 558 aa25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 DNAJB3Q8WWF6 145 aa25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 PPP2R3CQ969Q6 453 aa25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 CDY2AQ9Y6F7 541 aa25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 PLXNA4Q9HCM2 1894 aa25.12■■□□□ 1.61
TNFRSF25-208ENST00000453341 CD52P31358 61 aa25.11■■□□□ 1.61
TNFRSF25-208ENST00000453341 VCPP55072 806 aaKnown RBP25.11■■□□□ 1.61
TNFRSF25-208ENST00000453341 GRM4Q14833 912 aa25.11■■□□□ 1.61
TNFRSF25-208ENST00000453341 RBM23Q86U06 439 aaKnown RBP25.11■■□□□ 1.61
TNFRSF25-208ENST00000453341 CMTR2Q8IYT2 770 aaKnown RBP25.11■■□□□ 1.61
TNFRSF25-208ENST00000453341 POF1BQ8WVV4 589 aa25.11■■□□□ 1.61
TNFRSF25-208ENST00000453341 DSCC1Q9BVC3 393 aa25.11■■□□□ 1.61
TNFRSF25-208ENST00000453341 MBLAC1A4D2B0 266 aaPredicted RBP25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 TCF7P36402 384 aaPredicted RBP25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 PPFIA1Q13136 1202 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 GRIK4Q16099 956 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 NAALADL2Q58DX5 795 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 MARCH8Q5T0T0 291 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 ZBTB10Q96DT7 871 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 ASIC4Q96FT7 647 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 SENP7Q9BQF6 1050 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 LNPKQ9C0E8 428 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 CNNM2Q9H8M5 875 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 TUBE1Q9UJT0 475 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 VPS13AQ96RL7 3174 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 WDR87Q6ZQQ6 2873 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 LOXHD1Q8IVV2 1947 aa25.1■■□□□ 1.61
TNFRSF25-208ENST00000453341 PNMA6FA0A0J9YX94 578 aa25.09■■□□□ 1.61
TNFRSF25-208ENST00000453341 MARK3P27448 753 aa25.09■■□□□ 1.61
TNFRSF25-208ENST00000453341 SIGLEC14Q08ET2 396 aa25.09■■□□□ 1.61
TNFRSF25-208ENST00000453341 TRAF1Q13077 416 aa25.09■■□□□ 1.61
TNFRSF25-208ENST00000453341 PAN2Q504Q3 1202 aaKnown RBP25.09■■□□□ 1.61
TNFRSF25-208ENST00000453341 RSPH3Q86UC2 560 aa25.09■■□□□ 1.61
TNFRSF25-208ENST00000453341 PHF7Q9BWX1 381 aaPredicted RBP25.09■■□□□ 1.61
TNFRSF25-208ENST00000453341 GFRA3O60609 400 aa25.08■■□□□ 1.61
TNFRSF25-208ENST00000453341 RBM10P98175 930 aaKnown RBP25.08■■□□□ 1.61
TNFRSF25-208ENST00000453341 HDAC1Q13547 482 aaPredicted RBP25.08■■□□□ 1.61
TNFRSF25-208ENST00000453341 NPAS4Q8IUM7 802 aa25.08■■□□□ 1.61
TNFRSF25-208ENST00000453341 RPGRIP1Q96KN7 1286 aa25.08■■□□□ 1.61
TNFRSF25-208ENST00000453341 SENP2Q9HC62 589 aa25.08■■□□□ 1.61
TNFRSF25-208ENST00000453341 ATP9AO75110 1047 aa25.07■■□□□ 1.6
TNFRSF25-208ENST00000453341 GATMP50440 423 aa25.07■■□□□ 1.6
TNFRSF25-208ENST00000453341 MRPS6P82932 125 aaKnown RBP25.07■■□□□ 1.6
TNFRSF25-208ENST00000453341 PCNX4Q63HM2 1172 aa25.07■■□□□ 1.6
TNFRSF25-208ENST00000453341 DIAPH3Q9NSV4 1193 aa25.07■■□□□ 1.6
TNFRSF25-208ENST00000453341 FAM186AA6NE01 2351 aa25.07■■□□□ 1.6
TNFRSF25-208ENST00000453341 PLXNA3P51805 1871 aa25.06■■□□□ 1.6
TNFRSF25-208ENST00000453341 GSTTP1A0A1W2PQM5 241 aa25.06■■□□□ 1.6
TNFRSF25-208ENST00000453341 USP17L6PQ6QN14 398 aa25.06■■□□□ 1.6
TNFRSF25-208ENST00000453341 VN1R2Q8NFZ6 395 aa25.06■■□□□ 1.6
TNFRSF25-208ENST00000453341 SUSD6Q92537 303 aa25.06■■□□□ 1.6
TNFRSF25-208ENST00000453341 KCNA2P16389 499 aa25.05■■□□□ 1.6
TNFRSF25-208ENST00000453341 AVPR2P30518 371 aa25.05■■□□□ 1.6
TNFRSF25-208ENST00000453341 PIBF1Q8WXW3 757 aa25.05■■□□□ 1.6
TNFRSF25-208ENST00000453341 FAM49AQ9H0Q0 323 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF25-208ENST00000453341 IL25Q9H293 177 aa25.05■■□□□ 1.6
TNFRSF25-208ENST00000453341 ERAP1Q9NZ08 941 aa25.05■■□□□ 1.6
TNFRSF25-208ENST00000453341 PER2O15055 1255 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 PPFIA3O75145 1194 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 IGBP1P78318 339 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 PLEKHM2Q8IWE5 1019 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 ATP8B4Q8TF62 1192 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 SEPT1Q8WYJ6 367 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 FTHL17Q9BXU8 183 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 TLE6Q9H808 572 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 PADI3Q9ULW8 664 aa25.04■■□□□ 1.6
TNFRSF25-208ENST00000453341 MEIS2O14770 477 aa25.03■■□□□ 1.6
TNFRSF25-208ENST00000453341 SCG2P13521 617 aa25.03■■□□□ 1.6
TNFRSF25-208ENST00000453341 ATF7P17544 494 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF25-208ENST00000453341 TROAPQ12815 778 aa25.03■■□□□ 1.6
TNFRSF25-208ENST00000453341 XRRA1Q6P2D8 792 aa25.03■■□□□ 1.6
TNFRSF25-208ENST00000453341 NLRX1Q86UT6 975 aa25.03■■□□□ 1.6
TNFRSF25-208ENST00000453341 GIMAP8Q8ND71 665 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF25-208ENST00000453341 ATOH1Q92858 354 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF25-208ENST00000453341 FNDC1Q4ZHG4 1894 aaPredicted RBP25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 STAG3L1P0CL83 205 aa25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 TMEM62Q0P6H9 643 aa25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 PTPN21Q16825 1174 aa25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 SMARCC2Q8TAQ2 1214 aa25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 GLG1Q92896 1179 aa25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 TMX1Q9H3N1 280 aa25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 TRPV2Q9Y5S1 764 aa25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 SQORQ9Y6N5 450 aa25.02■■□□□ 1.6
TNFRSF25-208ENST00000453341 PDGFBP01127 241 aaPredicted RBP25.01■■□□□ 1.59
TNFRSF25-208ENST00000453341 INSRRP14616 1297 aa25.01■■□□□ 1.59
TNFRSF25-208ENST00000453341 GPRASP2Q96D09 838 aa25.01■■□□□ 1.59
TNFRSF25-208ENST00000453341 PCYT2Q99447 389 aa25.01■■□□□ 1.59
TNFRSF25-208ENST00000453341 OSBPL3Q9H4L5 887 aa25.01■■□□□ 1.59
TNFRSF25-208ENST00000453341 DCHS1Q96JQ0 3298 aa25■■□□□ 1.59
TNFRSF25-208ENST00000453341 H0Y858 1186 aa25■■□□□ 1.59
TNFRSF25-208ENST00000453341 PIK3CDO00329 1044 aa25■■□□□ 1.59
TNFRSF25-208ENST00000453341 ITGB5P18084 799 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms