RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 DDX11Q96FC9 970 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 AHCYL2Q96HN2 611 aaKnown RBP5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 FAXDC2Q96IV6 333 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 TBC1D32Q96NH3 1257 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 SPAG5Q96R06 1193 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 IWS1Q96ST2 819 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 RNF38Q9H0F5 515 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 VPS11Q9H270 941 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 DBNDD1Q9H9R9 158 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZCCHC17Q9NP64 241 aaKnown RBP5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 PCMTD2Q9NV79 361 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 LRP2BPQ9P2M1 347 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 PCDHGB6Q9Y5F9 930 aa5.13□□□□□ -1.59
HMGB3P21-201ENST00000452483 A6NNZ2 444 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 KIAA1324LA8MWY0 1029 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 C19orf81C9J6K1 198 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 K7ESF4 209 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 FZD9O00144 591 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 EYA2O00167 538 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 XPOTO43592 962 aaKnown RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 COBLO75128 1261 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZBED1O96006 694 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 CFBP00751 764 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 KCNA2P16389 499 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 BMP6P22004 513 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 ELF1P32519 619 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 KIF5BP33176 963 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 CAP2P40123 477 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 KRT83P78385 493 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 CACNB2Q08289 660 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 FAPQ12884 760 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 PPP2R5CQ13362 524 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 TTLL4Q14679 1199 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 ODF1Q14990 250 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 LRRC14Q15048 493 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 LLGL1Q15334 1064 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 TAF12Q16514 161 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 SKOR2Q2VWA4 1001 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 INAVAQ3KP66 663 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 SLC45A4Q5BKX6 768 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 TRIM61Q5EBN2 209 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 CDCA2Q69YH5 1023 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZCCHC8Q6NZY4 707 aaKnown RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 CPLX2Q6PUV4 134 aaKnown RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 UNC5AQ6ZN44 842 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 CCDC129Q6ZRS4 1044 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 BRINP3Q76B58 766 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 FGD2Q7Z6J4 655 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 DAAM2Q86T65 1068 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 ANKRD13BQ86YJ7 626 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 FAM156AQ8NDB6 213 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 C1orf162Q8NEQ5 155 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 GRIN3AQ8TCU5 1115 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 GATA6Q92908 595 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 SH3KBP1Q96B97 665 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 TRIM44Q96DX7 344 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 UBXN10Q96LJ8 280 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 FAM193BQ96PV7 902 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 TAAR9Q96RI9 348 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 METTL22Q9BUU2 404 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 OSBPL1AQ9BXW6 950 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 MRPL9Q9BYD2 267 aaKnown RBP5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 TSPY26PQ9H489 355 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 BRD9Q9H8M2 597 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 SLC52A2Q9HAB3 445 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 PDLIM7Q9NR12 457 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 MKS1Q9NXB0 559 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 CACNA2D2Q9NY47 1150 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 GJD2Q9UKL4 321 aa5.12□□□□□ -1.59
HMGB3P21-201ENST00000452483 RASA4BC9J798 803 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 CHL1O00533 1208 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 DYNC1LI2O43237 492 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 PRODHO43272 600 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 RASA4O43374 803 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 EFCAB14O75071 495 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 TMEM127O75204 238 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 ADMP35318 185 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 COPAP53621 1224 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 NAP1L1P55209 391 aaKnown RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 ERVK-21P61565 698 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 SLC7A5Q01650 507 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 DCTN1Q14203 1278 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZNF267Q14586 743 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZYXQ15942 572 aaKnown RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 GNPTABQ3T906 1256 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 CCDC38Q502W7 563 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZC3H12AQ5D1E8 599 aaKnown RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 RRP12Q5JTH9 1297 aaKnown RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 GPATCH4Q5T3I0 446 aaKnown RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 PIK3R6Q5UE93 754 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 CCDC30Q5VVM6 783 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 INTS5Q6P9B9 1019 aaKnown RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 B3GNT9Q6UX72 402 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 SEZ6L2Q6UXD5 910 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 MPRIPQ6WCQ1 1025 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 NSMFQ6X4W1 530 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 SHISA5Q8N114 240 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 TMEM40Q8WWA1 233 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 IPCEF1Q8WWN9 437 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 RSRC1Q96IZ7 334 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms