RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 KCTD10Q9H3F6 313 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 ANKZF1Q9H8Y5 726 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 MYO1AQ9UBC5 1043 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 TMX2Q9Y320 296 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 EIF3CLB5ME19 914 aaKnown RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 SASH3O75995 380 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 VIL1P09327 827 aaKnown RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 POLD1P28340 1107 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 PNKPQ96T60 521 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 GMLQ99445 158 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 EIF3CQ99613 913 aaKnown RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 WDR18Q9BV38 432 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 FAM53CQ9NYF3 392 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 PCNTO95613 3336 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 KRT86O43790 486 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 PRPF6O94906 941 aaKnown RBP13.31□□□□□ -0.28
COL27A1-202ENST00000451716 ADAM9Q13443 819 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 CACNA2D4Q7Z3S7 1137 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 CCDC170Q8IYT3 715 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 ANKRD13CQ8N6S4 541 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 ERMNQ8TAM6 284 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 BAP1Q92560 729 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 EIF2AK1Q9BQI3 630 aaKnown RBP13.31□□□□□ -0.28
COL27A1-202ENST00000451716 RUSC1Q9BVN2 902 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 IKZF4Q9H2S9 585 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 MYBP10242 640 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 PPP2R5AQ15172 486 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 ENOX2Q16206 610 aaKnown RBP13.31□□□□□ -0.28
COL27A1-202ENST00000451716 DEFB132Q7Z7B7 95 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 NEK11Q8NG66 645 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
COL27A1-202ENST00000451716 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
COL27A1-202ENST00000451716 IGLV3-22A0A075B6J6 115 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 ZNF185O15231 689 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 KCNA3P22001 575 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 PLA2G4AP47712 749 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 KIF11P52732 1056 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 KCNA1Q09470 495 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 SPA17Q15506 151 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 TPH2Q8IWU9 490 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 SYT2Q8N9I0 419 aaPredicted RBP13.3□□□□□ -0.28
COL27A1-202ENST00000451716 FAM20AQ96MK3 541 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 IFIH1Q9BYX4 1025 aaKnown RBP13.3□□□□□ -0.28
COL27A1-202ENST00000451716 MLXIPQ9HAP2 919 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 GOPCQ9HD26 462 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.3□□□□□ -0.283e-7■□□□□ 11.2
COL27A1-202ENST00000451716 TBX3O15119 743 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 AKR1B10O60218 316 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 TBC1D8O95759 1140 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 NR2F2P24468 414 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 CIITAP33076 1130 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 HOXD13P35453 343 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 ARID5AQ03989 594 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 DGKZQ13574 1117 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 POTEAQ6S8J7 498 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 LSM14BQ9BX40 385 aaKnown RBP13.3□□□□□ -0.28
COL27A1-202ENST00000451716 FRMD3A2A2Y4 597 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 PPP1R12AO14974 1030 aaPredicted RBP13.3□□□□□ -0.28
COL27A1-202ENST00000451716 NOL4O94818 638 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 POLR2FP61218 127 aaKnown RBP13.3□□□□□ -0.28
COL27A1-202ENST00000451716 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
COL27A1-202ENST00000451716 KIF5AQ12840 1032 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 RTKN2Q8IZC4 609 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 ARFGAP3Q9NP61 516 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 PCDHA13Q9Y5I0 950 aa13.3□□□□□ -0.28
COL27A1-202ENST00000451716 ABCB11O95342 1321 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
COL27A1-202ENST00000451716 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 VAV2P52735 878 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 WHAMMP3Q1A5X7 153 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 TDRD12Q587J7 1177 aaKnown RBP13.29□□□□□ -0.28
COL27A1-202ENST00000451716 TRIM59Q8IWR1 403 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 PIK3R5Q8WYR1 880 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 MMS19Q96T76 1030 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 SUGCTQ9HAC7 445 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 PKD2L1Q9P0L9 805 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 RGS17Q9UGC6 210 aaPredicted RBP13.29□□□□□ -0.28
COL27A1-202ENST00000451716 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 CAPN6Q9Y6Q1 641 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 HNRNPH3P31942 346 aaKnown RBP13.29□□□□□ -0.28
COL27A1-202ENST00000451716 CDK17Q00537 523 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 PDXDC1Q6P996 788 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 DYDC2Q96IM9 177 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 RABGAP1Q9Y3P9 1069 aa13.29□□□□□ -0.28
COL27A1-202ENST00000451716 PITPNM2Q9BZ72 1349 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 MYO1CO00159 1063 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 CLIC2O15247 247 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 TLR2O60603 784 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 MOCS3O95396 460 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms