RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PRLRP16471 622 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CALB2P22676 271 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PSMA4P25789 261 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 CALML3P27482 149 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ELF3P78545 371 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 DHX34Q14147 1143 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 KCNJ12Q14500 433 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PDIA5Q14554 519 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 LRRC36Q1X8D7 754 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 RGS21Q2M5E4 152 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 RUNDC3AQ59EK9 446 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TMEM63BQ5T3F8 832 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 EFCAB2Q5VUJ9 269 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 Q6ZUG5 572 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ARHGAP27Q6ZUM4 889 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 NEK10Q6ZWH5 1172 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 RASGRP2Q7LDG7 609 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 STX12Q86Y82 276 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CCDC105Q8IYK2 499 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 FUKQ8N0W3 1084 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SPATA5Q8NB90 893 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PDPRQ8NCN5 879 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 GABPB2Q8TAK5 448 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 PARD3BQ8TEW8 1205 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ATXN2LQ8WWM7 1075 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 EFHD2Q96C19 240 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 THAP11Q96EK4 314 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ZNF274Q96GC6 653 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 SLF1Q9BQI6 1058 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ALG1Q9BT22 464 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 NOC4LQ9BVI4 516 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 FTOQ9C0B1 505 aaKnown RBP eCLIP2.38□□□□□ -2.03
USP53-202ENST00000450251 ABCF3Q9NUQ8 709 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 BABAM1Q9NWV8 329 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SPATA7Q9P0W8 599 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MBD2Q9UBB5 411 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 L1RE1Q9UN81 338 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 NOVA2Q9UNW9 492 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 SMG5Q9UPR3 1016 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 WBP11Q9Y2W2 641 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 ATP10DQ9P241 1426 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 C16orf96A6NNT2 1141 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 CES2O00748 559 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ZBTB7BO15156 539 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 KRT37O76014 449 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 OCM2P0CE71 109 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 OCMP0CE72 109 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 PAX3P23760 479 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 GSTT1P30711 240 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 EIF2B2P49770 351 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 MXI1P50539 228 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 NLRP11P59045 1033 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 KIF23Q02241 960 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.37□□□□□ -2.03
USP53-202ENST00000450251 C2orf54Q08AI8 447 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 KAZNQ674X7 775 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 C11orf57Q6ZUT1 292 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 CDC37L1Q7L3B6 337 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PEX26Q7Z412 305 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 C11orf74Q86VG3 221 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 COL23A1Q86Y22 540 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 SCYL3Q8IZE3 742 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 KIRREL3Q8IZU9 778 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 KCTD17Q8N5Z5 321 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RBM46Q8TBY0 533 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 PHKBQ93100 1093 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 BORCS5Q969J3 196 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MAGED4Q96JG8 741 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 FMO2Q99518 471 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MMTAG2Q9BU76 263 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 FOXP3Q9BZS1 431 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 NACA2Q9H009 215 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 GOLPH3LQ9H4A5 285 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ZNF446Q9NWS9 450 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PLK2Q9NYY3 685 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PTTG2Q9NZH5 202 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TMOD2Q9NZR1 351 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SEL1LQ9UBV2 794 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 BIN2Q9UBW5 565 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 ATPIF1Q9UII2 106 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RWDD2AQ9UIY3 292 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RCOR1Q9UKL0 485 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RWDD3Q9Y3V2 267 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 KIAA1210Q9ULL0 1709 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 CDC42BPBQ9Y5S2 1711 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RNF17Q9BXT8 1623 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 CASZ1Q86V15 1759 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PABPN1LA6NDY0 278 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 SAC3D1A6NKF1 404 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 VWA5AO00534 786 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ATP6V1G1O75348 118 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 NDUFA10O95299 355 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TNFAIP8O95379 198 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 VSNL1P62760 191 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MRPL28Q13084 256 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 XRCC4Q13426 336 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MORC3Q14149 939 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 FLOT2Q14254 428 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RASA3Q14644 834 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ACAP2Q15057 778 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms