RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 SOX5P35711 763 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 ALCAMQ13740 583 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 SLFN12LQ6IEE8 588 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 MYL1P05976 194 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 ZNF18P17022 549 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 MSH2P43246 934 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 PTPN12Q05209 780 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 PSMD2Q13200 908 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 CFAP61Q8NHU2 1237 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 RAVER2Q9HCJ3 691 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 INPP5FQ9Y2H2 1132 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 ZHX2Q9Y6X8 837 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 SERPINB6P35237 376 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 STXBP2Q15833 593 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 PDZD8Q8NEN9 1154 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 SPZ1Q9BXG8 430 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 OLA1Q9NTK5 396 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 RWDD2AQ9UIY3 292 aa15.1■□□□□ 0.01
RAPGEF3-205ENST00000449771 PEX3P56589 373 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 RWDD4Q6NW29 188 aaKnown RBP15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 WRNIP1Q96S55 665 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 CAPS2Q9BXY5 557 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 HOXC10Q9NYD6 342 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 CLASP1Q7Z460 1538 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 SASH1O94885 1247 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 IL9RQ01113 521 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 SPATS2Q86XZ4 545 aaKnown RBP15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 GPT2Q8TD30 523 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 TLK1Q9UKI8 766 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 MYO3BQ8WXR4 1341 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 HSPH1Q92598 858 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 N4BP2L2Q92802 583 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 MTMR1Q13613 665 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 CDO1Q16878 200 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 LRRC23Q53EV4 343 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 DACT3Q96B18 629 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 FEM1BQ9UK73 627 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 LOC102724159A0A0B4J2E5 919 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 PWP2Q15269 919 aaKnown RBP15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 LLGL1Q15334 1064 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 TMED2Q15363 201 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 PTPN21Q16825 1174 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 SLC35F6Q8N357 371 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 DAAM1Q9Y4D1 1078 aa15.09■□□□□ 0.01
RAPGEF3-205ENST00000449771 SLFN14P0C7P3 912 aa15.08■□□□□ 0.01
RAPGEF3-205ENST00000449771 ADCY1Q08828 1119 aa15.08■□□□□ 0.01
RAPGEF3-205ENST00000449771 GIMAP8Q8ND71 665 aaPredicted RBP15.08■□□□□ 0.01
RAPGEF3-205ENST00000449771 TTLL11Q8NHH1 800 aa15.08■□□□□ 0.01
RAPGEF3-205ENST00000449771 ATP6V0A4Q9HBG4 840 aa15.08■□□□□ 0.01
RAPGEF3-205ENST00000449771 DENND3A2RUS2 1198 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 RPSAP08865 295 aaKnown RBP15.08■□□□□ 0
RAPGEF3-205ENST00000449771 THAP9Q9H5L6 903 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 PCDHA6Q9UN73 950 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 PCDHA8Q9Y5H6 950 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0
RAPGEF3-205ENST00000449771 LRRD1A4D1F6 860 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 KPNA2P52292 529 aaKnown RBP15.08■□□□□ 0
RAPGEF3-205ENST00000449771 CLEC4GQ6UXB4 293 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 THNSL1Q8IYQ7 743 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 DEPDC1BQ8WUY9 529 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 SPDL1Q96EA4 605 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 ZWILCHQ9H900 591 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 TSPOAP1O95153 1857 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 MOCS3O95396 460 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 CYP4F22Q6NT55 531 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 ALKBH8Q96BT7 664 aaKnown RBP15.08■□□□□ 0
RAPGEF3-205ENST00000449771 NUDCD1Q96RS6 583 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 PCDHB6Q9Y5E3 794 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 SFI1A8K8P3 1242 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 HLFQ16534 295 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 RNF219Q5W0B1 726 aaPredicted RBP15.08■□□□□ 0
RAPGEF3-205ENST00000449771 PPP1R13BQ96KQ4 1090 aa15.08■□□□□ 0
RAPGEF3-205ENST00000449771 TDRD3Q9H7E2 651 aaKnown RBP15.08■□□□□ 0
RAPGEF3-205ENST00000449771 AFF2P51816 1311 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 USP17L5A8MUK1 530 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 F8W8V4 182 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 ZBTB7AO95365 584 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 PLEKHA8P1O95397 391 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 SESN3P58005 492 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 RCN2Q14257 317 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 GSTA4O15217 222 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 IFNAR1P17181 557 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 NKX1-1Q15270 411 aaPredicted RBP15.07■□□□□ 0
RAPGEF3-205ENST00000449771 TRIP13Q15645 432 aaPredicted RBP15.07■□□□□ 0
RAPGEF3-205ENST00000449771 SNRNP48Q6IEG0 339 aaKnown RBP15.07■□□□□ 0
RAPGEF3-205ENST00000449771 NDUFAF2Q8N183 169 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 LRRC43Q8N309 656 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 Q9H521 79 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 RNF181Q9P0P0 153 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 FBXO40Q9UH90 709 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 FTCDO95954 541 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 LDHAP00338 332 aaKnown RBP15.07■□□□□ 0
RAPGEF3-205ENST00000449771 PMLP29590 882 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 AP3B2Q13367 1082 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 DPCR1Q3MIW9 517 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 MOSPD1Q9UJG1 213 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 MGEA5O60502 916 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 SERPING1P05155 500 aa15.07■□□□□ 0
RAPGEF3-205ENST00000449771 CDC25BP30305 580 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms