RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 VPS54Q9P1Q0 977 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 TUBE1Q9UJT0 475 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 KAT6AQ92794 2004 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 FAM86B1E9PN63 330 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 FAM86B2P0C5J1 330 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 NLRP5P59047 1200 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 SETQ01105 290 aaPredicted RBP17.37■□□□□ 0.37
CHD3-205ENST00000449744 TAP1Q03518 808 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 STK3Q13188 491 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 FAM117BQ6P1L5 589 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 PLPPR4Q7Z2D5 763 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 ARNTL2Q8WYA1 636 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 PCYT2Q99447 389 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 LARP6Q9BRS8 491 aaKnown RBP17.37■□□□□ 0.37
CHD3-205ENST00000449744 SH3GLB2Q9NR46 395 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 TCEAL9Q9UHQ7 104 aa17.37■□□□□ 0.37
CHD3-205ENST00000449744 BACH1O14867 736 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 GJB5O95377 273 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 INSRRP14616 1297 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 CCDC85BQ15834 202 aaPredicted RBP17.36■□□□□ 0.37
CHD3-205ENST00000449744 FAM26DQ5JW98 314 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 FAM160B1Q5W0V3 765 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.36■□□□□ 0.37
CHD3-205ENST00000449744 RUFY4Q6ZNE9 571 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 RPAINQ86UA6 219 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 MYOCDQ8IZQ8 938 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 RASGRP4Q8TDF6 673 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 RAD9AQ99638 391 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 ZNF577Q9BSK1 485 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 MYO9BQ13459 2157 aa17.36■□□□□ 0.37
CHD3-205ENST00000449744 UNC80Q8N2C7 3258 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 MBLAC1A4D2B0 266 aaPredicted RBP17.35■□□□□ 0.37
CHD3-205ENST00000449744 IPO5O00410 1097 aaKnown RBP17.35■□□□□ 0.37
CHD3-205ENST00000449744 ADAMTS3O15072 1205 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 GTPBP6O43824 516 aaPredicted RBP17.35■□□□□ 0.37
CHD3-205ENST00000449744 ATG7O95352 703 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 DEXIO95424 95 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 RPLP2P05387 115 aaKnown RBP17.35■□□□□ 0.37
CHD3-205ENST00000449744 SLC26A2P50443 739 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 PLCB4Q15147 1175 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 MIS18BP1Q6P0N0 1132 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 USP38Q8NB14 1042 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 DNAJB3Q8WWF6 145 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 CRYGNQ8WXF5 182 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 APBB2Q92870 758 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 TBC1D22BQ9NU19 505 aa17.35■□□□□ 0.37
CHD3-205ENST00000449744 IGLV3-22A0A075B6J6 115 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 POTEB3A0JP26 581 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 RFXAPO00287 272 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 EIF5BO60841 1220 aaKnown RBP17.34■□□□□ 0.37
CHD3-205ENST00000449744 CCNE2O96020 404 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 PTPRSQ13332 1948 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 PRR16Q569H4 304 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 MARCH8Q5T0T0 291 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 POTEBQ6S5H4 581 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 MICALL1Q8N3F8 863 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 UIMC1Q96RL1 719 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 IFIH1Q9BYX4 1025 aaKnown RBP17.34■□□□□ 0.37
CHD3-205ENST00000449744 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 FAM49AQ9H0Q0 323 aaPredicted RBP17.34■□□□□ 0.37
CHD3-205ENST00000449744 ZNF302Q9NR11 478 aa17.34■□□□□ 0.37
CHD3-205ENST00000449744 LCHNA4D1U4 455 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 RBAK-RBAKDNI3L0D1 243 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 M0QZ92 97 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 CDKL5O76039 1030 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 ARHGEF15O94989 841 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 CHRNA1P02708 482 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 GHRP10912 638 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 CIITAP33076 1130 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 IER5Q5VY09 327 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 PDXDC2PQ6P474 469 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 ABHD15Q6UXT9 468 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 OSBPL7Q9BZF2 842 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 SLKQ9H2G2 1235 aaPredicted RBP17.33■□□□□ 0.36
CHD3-205ENST00000449744 TSPYL2Q9H2G4 693 aaPredicted RBP17.33■□□□□ 0.36
CHD3-205ENST00000449744 INSL6Q9Y581 213 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 CDY2AQ9Y6F7 541 aa17.33■□□□□ 0.36
CHD3-205ENST00000449744 IGKV6D-21A0A0A0MT36 114 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 DHX15O43143 795 aaKnown RBP17.32■□□□□ 0.36
CHD3-205ENST00000449744 HBP1O60381 514 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 ANAPC15P60006 121 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 MRPS6P82932 125 aaKnown RBP17.32■□□□□ 0.36
CHD3-205ENST00000449744 KRT76Q01546 638 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 MGAT3Q09327 533 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 ZNF746Q6NUN9 644 aaPredicted RBP17.32■□□□□ 0.36
CHD3-205ENST00000449744 SWSAP1Q6NVH7 229 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
CHD3-205ENST00000449744 ZBTB10Q96DT7 871 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 PCDHA4Q9UN74 947 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 PCDHA2Q9Y5H9 948 aa17.32■□□□□ 0.36
CHD3-205ENST00000449744 MICAL3Q7RTP6 2002 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 LINC01553A4QN01 128 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 EPOPA6NHQ4 379 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 UPP2O95045 317 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 PSAPP07602 524 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 USP11P51784 963 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
CHD3-205ENST00000449744 ANKRD1Q15327 319 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms