RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 GOLGA8IPA6NC78 632 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 GOLGA8JA6NMD2 632 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 PALMO75781 387 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 GYS2P54840 703 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 TSNAXIP1Q2TAA8 658 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 E4F1Q66K89 784 aaPredicted RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 TBC1D31Q96DN5 1066 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 NRXN1Q9ULB1 1477 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 CCZ1BP86790 482 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 CCZ1P86791 482 aaPredicted RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 MTERF2Q49AM1 385 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 USP49Q70CQ1 688 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 HAUS1Q96CS2 278 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 FAM81BQ96LP2 452 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 ADAM21Q9UKJ8 722 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 ZC3H13Q5T200 1668 aaKnown RBP11.27□□□□□ -0.6
CTC1-202ENST00000449476 PIK3C2BO00750 1634 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 M0QZ92 97 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 PODNQ7Z5L7 613 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 KAZALD1Q96I82 304 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 FAM20AQ96MK3 541 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 FMO2Q99518 471 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 SENP2Q9HC62 589 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 TUBE1Q9UJT0 475 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 DNAJC12Q9UKB3 198 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 ODF2LQ9ULJ1 636 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 ADGRB1O14514 1584 aa11.27□□□□□ -0.6
CTC1-202ENST00000449476 H7C0C1 242 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 CTNND1O60716 968 aaKnown RBP11.27□□□□□ -0.61
CTC1-202ENST00000449476 NR3C1P04150 777 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 ASNSP08243 561 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 ATP5OP48047 213 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 PEX3P56589 373 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 FMR1Q06787 632 aaKnown RBP eCLIP11.27□□□□□ -0.61
CTC1-202ENST00000449476 QRICH1Q2TAL8 776 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 CCDC93Q567U6 631 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 TTBK2Q6IQ55 1244 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 CYP4F22Q6NT55 531 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 SEPT14Q6ZU15 432 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 TRIM50Q86XT4 487 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 WDR24Q96S15 920 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 PHF20Q9BVI0 1012 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 NCOA3Q9Y6Q9 1424 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 GOLGA8SH3BPF8 625 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 CCDC188H7C350 402 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 ALCAMQ13740 583 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 TACO1Q9BSH4 297 aaKnown RBP11.27□□□□□ -0.61
CTC1-202ENST00000449476 MRPL47Q9HD33 250 aaKnown RBP11.27□□□□□ -0.61
CTC1-202ENST00000449476 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.61
CTC1-202ENST00000449476 A0A1W2PQC6 194 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 CAPN9O14815 690 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 FGGP02679 453 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 CLTAP09496 248 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 FCER1AP12319 257 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 GFPT1Q06210 699 aaPredicted RBP11.27□□□□□ -0.61
CTC1-202ENST00000449476 KCTD2Q14681 263 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 MIS18BP1Q6P0N0 1132 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 MAP7D3Q8IWC1 876 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 HACE1Q8IYU2 909 aa11.27□□□□□ -0.61
CTC1-202ENST00000449476 IRX2Q9BZI1 471 aaPredicted RBP11.27□□□□□ -0.61
CTC1-202ENST00000449476 EPB41L4AQ9HCS5 686 aaPredicted RBP11.27□□□□□ -0.61
CTC1-202ENST00000449476 PLEKHG2Q9H7P9 1386 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 F5H6K3 240 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 SGK1O00141 431 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 NR1D1P20393 614 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 SLCO1A2P46721 670 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 TFAMQ00059 246 aaKnown RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 KLRC3Q07444 240 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 SEMA3FQ13275 785 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 TFDP1Q14186 410 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 KCNB1Q14721 858 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 RCSD1Q6JBY9 416 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 CCDC197Q8NCU1 140 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 NEK9Q8TD19 979 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 RIOK1Q9BRS2 568 aaKnown RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 CCSER1Q9C0I3 900 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 NOVA2Q9UNW9 492 aaKnown RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 SUN1O94901 812 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 ADRA2BP18089 450 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 YWHAGP61981 247 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTC1-202ENST00000449476 DR1Q01658 176 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 ADCY1Q08828 1119 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 PHLDB2Q86SQ0 1253 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 CCDC117Q8IWD4 279 aaPredicted RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 RHOT2Q8IXI1 618 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 ADGRF4Q8IZF3 695 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 LRRC8CQ8TDW0 803 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 CCT6BQ92526 530 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 ZNF341Q9BYN7 854 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms