RNA–Protein interactions for RNA: ENST00000449407.6

SORBS2-231, Transcript of sorbin and SH3 domain containing 2, human

TSL 1 (best) BASIC

Gene SORBS2, Length 3,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-231	ENST00000449407	CDK5RAP3	Q96JB5	506 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	PAIP2	Q9BPZ3	127 aa	Known RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	ARHGAP23	Q9P227	1491 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	SERPING1	P05155	500 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	PYGL	P06737	847 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	UQCRFS1P1	P0C7P4	283 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	HNRNPH3	P31942	346 aa	Known RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	MSH2	P43246	934 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	PTK2	Q05397	1052 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	SLC18A3	Q16572	532 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	AGBL2	Q5U5Z8	902 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	DENND2C	Q68D51	928 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	SPIRE2	Q8WWL2	714 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	ZFAT	Q9P243	1243 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	MAGEB6P1	A0A0J9YX57	407 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	CYP2D6	P10635	497 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	NEFH	P12036	1026 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	LACTB	P83111	547 aa	Predicted RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	AADACL2	Q6P093	401 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	KIF6	Q6ZMV9	814 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	SEPT14	Q6ZU15	432 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	NAF1	Q96HR8	494 aa	Known RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	TMEM237	Q96Q45	408 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	DDX23	Q9BUQ8	820 aa	Known RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	ZMYND12	Q9H0C1	365 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	SEMA4A	Q9H3S1	761 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	ETNK1	Q9HBU6	452 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	SEPT11	Q9NVA2	429 aa	Known RBP	11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	ATP6V0A2	Q9Y487	856 aa		11.3	□□□□□ -0.6
SORBS2-231	ENST00000449407	LCA5L	O95447	670 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	PAPOLA	P51003	745 aa	Known RBP	11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	PUM3	Q15397	648 aa	Known RBP	11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	FBXO25	Q8TCJ0	367 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	ADAM22	Q9P0K1	906 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	PTPN22	Q9Y2R2	807 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	RIC1	Q4ADV7	1423 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	MYMK	A6NI61	221 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	RANBP1	P43487	201 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	RAB27A	P51159	221 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	RAD23B	P54727	409 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	CTSW	P56202	376 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	USP4	Q13107	963 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	ZNF268	Q14587	947 aa	Predicted RBP	11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	TNIP1	Q15025	636 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	ASIC2	Q16515	512 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	PFKFB3	Q16875	520 aa	Predicted RBP	11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	TCERG1L	Q5VWI1	586 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.29	□□□□□ -0.6	9e-7	■□□□□ 10.5
SORBS2-231	ENST00000449407	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	TBK1	Q9UHD2	729 aa		11.29	□□□□□ -0.6
SORBS2-231	ENST00000449407	TSPOAP1	O95153	1857 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	C5	P01031	1676 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	POTEM	A6NI47	508 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	HIP1R	O75146	1068 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	NOL4	O94818	638 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	SLC5A1	P13866	664 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	CCND1	P24385	295 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	PMS2	P54278	862 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	LONRF1	Q17RB8	773 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	RNF220	Q5VTB9	566 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	SV2B	Q7L1I2	683 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	HOOK3	Q86VS8	718 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	SCFD2	Q8WU76	684 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	CNOT10	Q9H9A5	744 aa	Known RBP	11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	OSGEP	Q9NPF4	335 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	PCDHGC5	Q9Y5F6	944 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	LTN1	O94822	1766 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	SSU72P8	A0A1W2PR75	194 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	ARID4A	P29374	1257 aa	Predicted RBP	11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	TRAPPC10	P48553	1259 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	RPS6KA3	P51812	740 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	BLMH	Q13867	455 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	ALKBH5	Q6P6C2	394 aa	Known RBP	11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	ZNF449	Q6P9G9	518 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	FITM2	Q8N6M3	262 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	NEK9	Q8TD19	979 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	P3H4	Q92791	437 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	RNF25	Q96BH1	459 aa	Predicted RBP	11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	ISCA1	Q9BUE6	129 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	ADAM7	Q9H2U9	754 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	ECM29	Q5VYK3	1845 aa		11.28	□□□□□ -0.6
SORBS2-231	ENST00000449407	LRRD1	A4D1F6	860 aa		11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	GH1	P01241	217 aa		11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	PAEP	P09466	180 aa		11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	SLC9A1	P19634	815 aa		11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	GYG1	P46976	350 aa		11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	USP11	P51784	963 aa		11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	COPS2	P61201	443 aa		11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	CENPP	Q6IPU0	288 aa		11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.27	□□□□□ -0.6
SORBS2-231	ENST00000449407	VGLL2	Q8N8G2	317 aa		11.27	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms