RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ABL2P42684 1182 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 BYSLQ13895 437 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 MAATS1Q7Z4T9 603 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 DGKHQ86XP1 1220 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 RBM12BQ8IXT5 1001 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 SPATA4Q8NEY3 305 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 CNKSR1Q969H4 720 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 LGALS16A8MUM7 142 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 MXRA7P84157 204 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 ATP2C1P98194 919 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 ZNF174Q15697 407 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 DYNLL2Q96FJ2 89 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 CCDC42Q96M95 316 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 BLOC1S6Q9UL45 172 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 DPPA5A6NC42 116 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 TPP2P29144 1249 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 MTIF2P46199 727 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 GRIN1Q05586 938 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 CUL3Q13618 768 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 SLC35G1Q2M3R5 365 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 DTHD1Q6ZMT9 781 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 ARMC9Q7Z3E5 817 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 MYLK4Q86YV6 388 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 GRAMD1CQ8IYS0 662 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 ZFAND2BQ8WV99 257 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 RNF14Q9UBS8 474 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 LRRD1A4D1F6 860 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 RASSF10A6NK89 507 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 PPP1R3GB7ZBB8 358 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 PPP1R15BQ5SWA1 713 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 CREG2Q8IUH2 290 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 CD302Q8IX05 232 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 TEKT4Q8WW24 435 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 V9GY48 417 aaPredicted RBP14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 VEGFAP15692 232 aaPredicted RBP14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 PAK2Q13177 524 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 NDST4Q9H3R1 872 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 VPS54Q9P1Q0 977 aa14.71□□□□□ -0.05
SYNGAP1-204ENST00000449372 WNT7AO00755 349 aa14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 PPEF1O14829 653 aaPredicted RBP14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 ADAMTS3O15072 1205 aa14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 BAG3O95817 575 aa14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 PARP1P09874 1014 aaKnown RBP14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 TMOD1P28289 359 aa14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 HERVK_113P62684 666 aa14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 ZBED6P86452 979 aa14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 TRIM4Q9C037 500 aa14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 EXOC1Q9NV70 894 aa14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.71□□□□□ -0.06
SYNGAP1-204ENST00000449372 FAM205CA6NFA0 338 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 FAM153BP0C7A2 387 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 RASA1P20936 1047 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 BTDP43251 543 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 PTGDRQ13258 359 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 FAM153CQ494X1 144 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 MB21D1Q8N884 522 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 TGFBRAP1Q8WUH2 860 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 FAM153AQ9UHL3 310 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 CAPN11Q9UMQ6 739 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 NFU1Q9UMS0 254 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 C5orf60A6NFR6 353 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 CCT8L1PA6NM43 557 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 LDHCP07864 332 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 HMGB2P26583 209 aaKnown RBP14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 TFAP4Q01664 338 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 IFT81Q8WYA0 676 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 PIDD1Q9HB75 910 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 PICK1Q9NRD5 415 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 SIPA1L1O43166 1804 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 MAFGO15525 162 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 GUCY2FP51841 1108 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 ODF2Q5BJF6 829 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 HAUS3Q68CZ6 603 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 C8orf74Q6P047 294 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 C16orf86Q6ZW13 317 aa14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 CCDC84Q86UT8 332 aaPredicted RBP14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 C1orf131Q8NDD1 294 aaKnown RBP14.7□□□□□ -0.06
SYNGAP1-204ENST00000449372 FLT1P17948 1338 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 PHF20L1A8MW92 1017 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 EVI5O60447 810 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 CCND1P24385 295 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 ITIH3Q06033 890 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 PFKFB3Q16875 520 aaPredicted RBP14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 ANKRD20A2Q5SQ80 823 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 ANKRD20A1Q5TYW2 823 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 ANKRD20A3Q5VUR7 823 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 NUGGCQ68CJ6 796 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 NLGN1Q8N2Q7 840 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 EPSTI1Q96J88 318 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 SH3GLB2Q9NR46 395 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 MAD2L2Q9UI95 211 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 hCG_1642624A0A1W2PR95 340 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 MACROD2A1Z1Q3 448 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 M0R2N6 131 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 ZNF268Q14587 947 aaPredicted RBP14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 TAF11Q15544 211 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 IFT20Q8IY31 132 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 TEX9Q8N6V9 391 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 TSPY2A6NKD2 308 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 CARSP49589 748 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms