RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 KIAA1468Q9P260 1216 aa21.56■■□□□ 1.04
RPS28-202ENST00000449223 PSAPP07602 524 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 MIS18BP1Q6P0N0 1132 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 PLIN2Q99541 437 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 BEGAINQ9BUH8 593 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 GZF1Q9H116 711 aaPredicted RBP21.55■■□□□ 1.04
RPS28-202ENST00000449223 WRAP73Q9P2S5 460 aaPredicted RBP21.55■■□□□ 1.04
RPS28-202ENST00000449223 TUBE1Q9UJT0 475 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 SAMM50Q9Y512 469 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 IGSF9BQ9UPX0 1349 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 MYH9P35579 1960 aaKnown RBP21.55■■□□□ 1.04
RPS28-202ENST00000449223 SYCE3A1L190 88 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 FOXN1O15353 648 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 DKC1O60832 514 aaKnown RBP eCLIP21.55■■□□□ 1.04
RPS28-202ENST00000449223 SUPT20HL2P0C7V6 817 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 XRCC6P12956 609 aaKnown RBP eCLIP21.55■■□□□ 1.04
RPS28-202ENST00000449223 CYP2C19P33261 490 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 ADCYAP1R1P41586 468 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 PRMT2P55345 433 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 PSMC5P62195 406 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 ARHGAP1Q07960 439 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 DPYDQ12882 1025 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 LAMC2Q13753 1193 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 CTTNQ14247 550 aaKnown RBP21.55■■□□□ 1.04
RPS28-202ENST00000449223 CCDC144BQ3MJ40 725 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 TRIB2Q92519 343 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 NACC1Q96RE7 527 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 MLXIPQ9HAP2 919 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 DNM3Q9UQ16 869 aa21.55■■□□□ 1.04
RPS28-202ENST00000449223 GSTTP1A0A1W2PQM5 241 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 GTPBP6O43824 516 aaPredicted RBP21.54■■□□□ 1.04
RPS28-202ENST00000449223 EYA4O95677 639 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 GH1P01241 217 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 SARSP49591 514 aaKnown RBP21.54■■□□□ 1.04
RPS28-202ENST00000449223 AMPD3Q01432 767 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 PNOCQ13519 176 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 SV2BQ7L1I2 683 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 TPH2Q8IWU9 490 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 DHX37Q8IY37 1157 aaKnown RBP21.54■■□□□ 1.04
RPS28-202ENST00000449223 CKAP2LQ8IYA6 745 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 BANK1Q8NDB2 785 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 AFAP1L1Q8TED9 768 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 SEPT1Q8WYJ6 367 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 ATP6V0A1Q93050 837 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 GPR20Q99678 358 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 FUCA2Q9BTY2 467 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 LRRC27Q9C0I9 530 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 ZHX1Q9UKY1 873 aaPredicted RBP21.54■■□□□ 1.04
RPS28-202ENST00000449223 TELO2Q9Y4R8 837 aa21.54■■□□□ 1.04
RPS28-202ENST00000449223 E9PMD0 336 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 SMPD1P17405 629 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 SLC12A3P55017 1021 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 PSMC6P62333 389 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 HSDL1Q3SXM5 330 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 TMEM63BQ5T3F8 832 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 MFSD14CQ5VZR4 134 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 CCDC60Q8IWA6 550 aaPredicted RBP21.53■■□□□ 1.04
RPS28-202ENST00000449223 SYT2Q8N9I0 419 aaPredicted RBP21.53■■□□□ 1.04
RPS28-202ENST00000449223 PPTC7Q8NI37 304 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 PXYLP1Q8TE99 480 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 C7orf25Q9BPX7 421 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 TRIM9Q9C026 710 aa21.53■■□□□ 1.04
RPS28-202ENST00000449223 DBR1Q9UK59 544 aaKnown RBP21.53■■□□□ 1.04
RPS28-202ENST00000449223 MAFBQ9Y5Q3 323 aaPredicted RBP21.53■■□□□ 1.04
RPS28-202ENST00000449223 EMSYQ7Z589 1322 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.52■■□□□ 1.04
RPS28-202ENST00000449223 PRR29P0C7W0 189 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 PLA2G4BP0C869 781 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 HOXD8P13378 290 aaPredicted RBP21.52■■□□□ 1.04
RPS28-202ENST00000449223 CYBAP13498 195 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 AFMP43652 599 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 UGCGQ16739 394 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 GRAMD1CQ8IYS0 662 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 GSDMAQ96QA5 445 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 GNEQ9Y223 722 aaKnown RBP21.52■■□□□ 1.04
RPS28-202ENST00000449223 Q9Y3F1 56 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 PCDHA5Q9Y5H7 936 aa21.52■■□□□ 1.04
RPS28-202ENST00000449223 LGR5O75473 907 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 TNFAIP2Q03169 654 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 MCM6Q14566 821 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 LRSAM1Q6UWE0 723 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 COPS5Q92905 334 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 SPATA33Q96N06 139 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 KCND2Q9NZV8 630 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 GABBR1Q9UBS5 961 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 HTTP42858 3142 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 ARID2Q68CP9 1835 aa21.51■■□□□ 1.03
RPS28-202ENST00000449223 ADCY6O43306 1168 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 ZNF862O60290 1169 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 SMC2O95347 1197 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 TCF7P36402 384 aaPredicted RBP21.5■■□□□ 1.03
RPS28-202ENST00000449223 SWSAP1Q6NVH7 229 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 TRIML1Q8N9V2 468 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 PCYT2Q99447 389 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 ANKEF1Q9NU02 776 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 FAM184BQ9ULE4 1060 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 NOP56O00567 594 aaKnown RBP21.5■■□□□ 1.03
RPS28-202ENST00000449223 STBD1O95210 358 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 SP4Q02446 784 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 CUL4BQ13620 913 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms