RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 KCND2Q9NZV8 630 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 SNCAIPQ9Y6H5 919 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 OTOFQ9HC10 1997 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 FRMD3A2A2Y4 597 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 ARP10275 920 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 PBX1P40424 430 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 TERF1P54274 439 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 PPATQ06203 517 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 PRKG1Q13976 671 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 ARID5BQ14865 1188 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 PGM5Q15124 567 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 HERC4Q5GLZ8 1057 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 ARHGEF16Q5VV41 709 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 ANKRD40Q6AI12 368 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 NSMFQ6X4W1 530 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 ANKRD13AQ8IZ07 590 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 MB21D1Q8N884 522 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 CCDC51Q96ER9 411 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 POM121Q96HA1 1249 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 NACC1Q96RE7 527 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 UIMC1Q96RL1 719 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 RMDN3Q96TC7 470 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 DUSP9Q99956 384 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 ACAD9Q9H845 621 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 COL20A1Q9P218 1284 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 PTPRFP10586 1907 aa11.73□□□□□ -0.53
VIPAS39-203ENST00000448935 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 A0A1W2PQC6 194 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 IQCA1LA6NCM1 817 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 AKR1B15C9JRZ8 316 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 EML1O00423 815 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 MAFGO15525 162 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 STX10O60499 249 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 STAM2O75886 525 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 GAP43P17677 238 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 ITGB5P18084 799 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 CCND2P30279 289 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 EPHX2P34913 555 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 DNM2P50570 870 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 PMS1P54277 932 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 CYP4A11Q02928 519 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 PABPC4Q13310 644 aaKnown RBP eCLIP11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 MTMR1Q13613 665 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 B3GNT9Q6UX72 402 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 NLRX1Q86UT6 975 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 ERO1BQ86YB8 467 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 CREBRFQ8IUR6 639 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 CHST13Q8NET6 341 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 PANX2Q96RD6 677 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 TAAR1Q96RJ0 339 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 PDCD2LQ9BRP1 358 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 VPS16Q9H269 839 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 TMX1Q9H3N1 280 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 PXMP2Q9NR77 195 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 KCNH7Q9NS40 1196 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 TAB2Q9NYJ8 693 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 FZD1Q9UP38 647 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 COL4A3BPQ9Y5P4 624 aa11.72□□□□□ -0.53
VIPAS39-203ENST00000448935 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 LGALS16A8MUM7 142 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 ADM5C9JUS6 153 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 KIF2AO00139 706 aaPredicted RBP11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 CXCL11O14625 94 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 ARHGAP6O43182 974 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 TEX33O43247 280 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 CHMP2AO43633 222 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 GRIN3BO60391 1043 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 SLITRK3O94933 977 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 TUBB4AP04350 444 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 MTIF2P46199 727 aaKnown RBP11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 GIT2Q14161 759 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 SLC30A10Q6XR72 485 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 IRF2BP1Q8IU81 584 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 TPH2Q8IWU9 490 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 NSUN6Q8TEA1 469 aaKnown RBP11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 IQCDQ96DY2 449 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 DYDC2Q96IM9 177 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 CDHR1Q96JP9 859 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 TUBGCP2Q9BSJ2 902 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 BHMT2Q9H2M3 363 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 SEMA6BQ9H3T3 888 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 AGO4Q9HCK5 861 aaKnown RBP11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 FBXO40Q9UH90 709 aa11.71□□□□□ -0.53
VIPAS39-203ENST00000448935 GLTPD2A6NH11 291 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 SPDYE5A6NIY4 337 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 COBLO75128 1261 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 GNA14O95837 355 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 P4HBP07237 508 aaKnown RBP11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 SFNP31947 248 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 MRPS9P82933 396 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms