RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
SREBF1-207ENST00000447641 KCNMB3Q9NPA1 279 aa15.99■□□□□ 0.15
SREBF1-207ENST00000447641 TBX21Q9UL17 535 aa15.99■□□□□ 0.15
SREBF1-207ENST00000447641 TRIP12Q14669 1992 aaPredicted RBP15.98■□□□□ 0.15
SREBF1-207ENST00000447641 EMSYQ7Z589 1322 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 KIF28PB7ZC32 967 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 TBX3O15119 743 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 B4GALT4O60513 344 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 SP4Q02446 784 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 MYO9BQ13459 2157 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 HAS1Q92839 578 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 FAM20AQ96MK3 541 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 UIMC1Q96RL1 719 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 CTAGE1Q96RT6 745 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 TRPV6Q9H1D0 765 aa15.98■□□□□ 0.15
SREBF1-207ENST00000447641 CCNT1O60563 726 aaKnown RBP15.97■□□□□ 0.15
SREBF1-207ENST00000447641 KRT76Q01546 638 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 LARP1BQ659C4 914 aaKnown RBP15.97■□□□□ 0.15
SREBF1-207ENST00000447641 PLPPR4Q7Z2D5 763 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 TRIM50Q86XT4 487 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 PPP1R13LQ8WUF5 828 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 GJA10Q969M2 543 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 RNPEPQ9H4A4 650 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 SMARCAD1Q9H4L7 1026 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 HDAC6Q9UBN7 1215 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 GTF2IRD1Q9UHL9 959 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 RAPGEFL1Q9UHV5 662 aa15.97■□□□□ 0.15
SREBF1-207ENST00000447641 MYH9P35579 1960 aaKnown RBP15.96■□□□□ 0.15
SREBF1-207ENST00000447641 KAT6AQ92794 2004 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 TLR3O15455 904 aaKnown RBP15.96■□□□□ 0.15
SREBF1-207ENST00000447641 SUPT20HL2P0C7V6 817 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 TRAPPC10P48553 1259 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 ADAM17P78536 824 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 FPGSQ05932 587 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 HIC1Q14526 733 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 TJAP1Q5JTD0 557 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 UTP14CQ5TAP6 766 aaKnown RBP15.96■□□□□ 0.15
SREBF1-207ENST00000447641 LRCH2Q5VUJ6 765 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 GDF6Q6KF10 455 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-207ENST00000447641 SMAP1Q8IYB5 467 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-207ENST00000447641 AFAP1L1Q8TED9 768 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.96■□□□□ 0.151e-9■■□□□ 14.5
SREBF1-207ENST00000447641 TRMT13Q9NUP7 481 aaKnown RBP15.96■□□□□ 0.15
SREBF1-207ENST00000447641 ERAP1Q9NZ08 941 aa15.96■□□□□ 0.15
SREBF1-207ENST00000447641 ZNF215Q9UL58 517 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-207ENST00000447641 DDX39AO00148 427 aaKnown RBP15.95■□□□□ 0.14
SREBF1-207ENST00000447641 GAS7O60861 476 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 SMIM10L2AP0DMW4 78 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 SMIM10L2BP0DMW5 78 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 PDIA4P13667 645 aaKnown RBP15.95■□□□□ 0.14
SREBF1-207ENST00000447641 RAG1P15918 1043 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 PBX2P40425 430 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 TOB1P50616 345 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-207ENST00000447641 STAT5BP51692 787 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 PPP2R5CQ13362 524 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 ORC2Q13416 577 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-207ENST00000447641 C16orf59Q7L2K0 433 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 C7orf31Q8N865 590 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 RDM1Q8NG50 284 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 MTMR9Q96QG7 549 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 TEKT3Q9BXF9 490 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 UNC45AQ9H3U1 944 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 TMEM39AQ9NV64 488 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 VAV3Q9UKW4 847 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 PCDHA10Q9Y5I2 948 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 MAFBQ9Y5Q3 323 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-207ENST00000447641 BDP1A6H8Y1 2624 aa15.95■□□□□ 0.14
SREBF1-207ENST00000447641 GRXCR1A8MXD5 290 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 TIMP1P01033 207 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 COL9A1P20849 921 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 PDCP20941 246 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 SFNP31947 248 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 SLC26A2P50443 739 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 SPIRE1Q08AE8 756 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 FAM47CQ5HY64 1035 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 RASIP1Q5U651 963 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 MIS18BP1Q6P0N0 1132 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 POTEDQ86YR6 584 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 CCDC60Q8IWA6 550 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-207ENST00000447641 SYMPKQ92797 1274 aaKnown RBP15.94■□□□□ 0.14
SREBF1-207ENST00000447641 GLG1Q92896 1179 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 NOC4LQ9BVI4 516 aaKnown RBP15.94■□□□□ 0.14
SREBF1-207ENST00000447641 ZNF576Q9H609 170 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 DISC1Q9NRI5 854 aa15.94■□□□□ 0.14
SREBF1-207ENST00000447641 CIZ1Q9ULV3 898 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-207ENST00000447641 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-207ENST00000447641 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-207ENST00000447641 WDR64B1ANS9 1081 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 H3BQV1 296 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 TNFRSF10AO00220 468 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 PSAPP07602 524 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 ATP4AP20648 1035 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 JAK3P52333 1124 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 CHMP4BP1P59074 171 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 ZNF200P98182 395 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-207ENST00000447641 RBL2Q08999 1139 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 PTGISQ16647 500 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 SWSAP1Q6NVH7 229 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 SLFN12Q8IYM2 578 aa15.93■□□□□ 0.14
SREBF1-207ENST00000447641 C4orf32Q8N8J7 132 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms