RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 IGBP1P78318 339 aa20.79■□□□□ 0.92
COL9A1-205ENST00000447041 MGAT3Q09327 533 aa20.79■□□□□ 0.92
COL9A1-205ENST00000447041 ITGB3BPQ13352 177 aaPredicted RBP20.79■□□□□ 0.92
COL9A1-205ENST00000447041 TAF2Q6P1X5 1199 aa20.79■□□□□ 0.92
COL9A1-205ENST00000447041 IL27Q8NEV9 243 aa20.79■□□□□ 0.92
COL9A1-205ENST00000447041 SP7Q8TDD2 431 aaPredicted RBP20.79■□□□□ 0.92
COL9A1-205ENST00000447041 BRF1Q92994 677 aa20.79■□□□□ 0.92
COL9A1-205ENST00000447041 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
COL9A1-205ENST00000447041 COL4A6Q14031 1691 aa20.79■□□□□ 0.92
COL9A1-205ENST00000447041 NFASCO94856 1347 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 NID2Q14112 1375 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 MBLAC1A4D2B0 266 aaPredicted RBP20.78■□□□□ 0.92
COL9A1-205ENST00000447041 UPP2O95045 317 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 SREBF1P36956 1147 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 AP3B2Q13367 1082 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 PFKFB3Q16875 520 aaPredicted RBP20.78■□□□□ 0.92
COL9A1-205ENST00000447041 CEP55Q53EZ4 464 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 RPAINQ86UA6 219 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 TEX2Q8IWB9 1127 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 DNAJB3Q8WWF6 145 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 APBB2Q92870 758 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 TOP1MTQ969P6 601 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 UHRF1Q96T88 793 aaPredicted RBP20.78■□□□□ 0.92
COL9A1-205ENST00000447041 SDF4Q9BRK5 362 aa20.78■□□□□ 0.92
COL9A1-205ENST00000447041 AGO4Q9HCK5 861 aaKnown RBP20.78■□□□□ 0.92
COL9A1-205ENST00000447041 TCF20Q9UGU0 1960 aaKnown RBP20.77■□□□□ 0.92
COL9A1-205ENST00000447041 TTC28Q96AY4 2481 aa20.77■□□□□ 0.92
COL9A1-205ENST00000447041 ADAMTS3O15072 1205 aa20.77■□□□□ 0.92
COL9A1-205ENST00000447041 ACTR2P61160 394 aa20.77■□□□□ 0.92
COL9A1-205ENST00000447041 JAKMIP3Q5VZ66 844 aa20.77■□□□□ 0.92
COL9A1-205ENST00000447041 BLOC1S2Q6QNY1 142 aa20.77■□□□□ 0.92
COL9A1-205ENST00000447041 NLRC5Q86WI3 1866 aa20.77■□□□□ 0.92
COL9A1-205ENST00000447041 BMP1P13497 986 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 SCG2P13521 617 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 INSRRP14616 1297 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 LPIN1Q14693 890 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 RSPH3Q86UC2 560 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 FBXO22Q8NEZ5 403 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 NECAB3Q96P71 396 aaPredicted RBP20.76■□□□□ 0.91
COL9A1-205ENST00000447041 YME1L1Q96TA2 773 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 GLT8D2Q9H1C3 349 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 AZI2Q9H6S1 392 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 LMCD1Q9NZU5 365 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 TRPC6Q9Y210 931 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 CDY2AQ9Y6F7 541 aa20.76■□□□□ 0.91
COL9A1-205ENST00000447041 FAM86B1E9PN63 330 aa20.75■□□□□ 0.91
COL9A1-205ENST00000447041 DDX39AO00148 427 aaKnown RBP20.75■□□□□ 0.91
COL9A1-205ENST00000447041 MEIS1O00470 390 aa20.75■□□□□ 0.91
COL9A1-205ENST00000447041 FAM86B2P0C5J1 330 aa20.75■□□□□ 0.91
COL9A1-205ENST00000447041 RPS6KB1P23443 525 aa20.75■□□□□ 0.91
COL9A1-205ENST00000447041 PLCB4Q15147 1175 aa20.75■□□□□ 0.91
COL9A1-205ENST00000447041 PKN1Q16512 942 aa20.75■□□□□ 0.91
COL9A1-205ENST00000447041 TRAPPC12Q8WVT3 735 aa20.75■□□□□ 0.91
COL9A1-205ENST00000447041 FAM49AQ9H0Q0 323 aaPredicted RBP20.75■□□□□ 0.91
COL9A1-205ENST00000447041 CCDC196A0A1B0GTZ2 297 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 PPFIA3O75145 1194 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 CCNE2O96020 404 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 ZNF76P36508 570 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 AAK1Q2M2I8 961 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 RALGAPA2Q2PPJ7 1873 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 FBXO47Q5MNV8 452 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 PHKBQ93100 1093 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 COG5Q9UP83 839 aa20.74■□□□□ 0.91
COL9A1-205ENST00000447041 IGLV3-22A0A075B6J6 115 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 ESYT2A0FGR8 921 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 RRN3P2A6NIE6 340 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 STAT5BP51692 787 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 MRPS6P82932 125 aaKnown RBP20.73■□□□□ 0.91
COL9A1-205ENST00000447041 EPC2Q52LR7 807 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 NIPA1Q7RTP0 329 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 PLPPR4Q7Z2D5 763 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 PLA2G4DQ86XP0 818 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 CRYGNQ8WXF5 182 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 HLA-CQ95604 372 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 UIMC1Q96RL1 719 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 AGXT2Q9BYV1 514 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 ZMYND12Q9H0C1 365 aa20.73■□□□□ 0.91
COL9A1-205ENST00000447041 PRPF3O43395 683 aaKnown RBP20.72■□□□□ 0.91
COL9A1-205ENST00000447041 ATG7O95352 703 aa20.72■□□□□ 0.91
COL9A1-205ENST00000447041 TMEM62Q0P6H9 643 aa20.72■□□□□ 0.91
COL9A1-205ENST00000447041 TSHZ1Q6ZSZ6 1077 aa20.72■□□□□ 0.91
COL9A1-205ENST00000447041 FBXL16Q8N461 479 aa20.72■□□□□ 0.91
COL9A1-205ENST00000447041 AGO3Q9H9G7 860 aaKnown RBP20.72■□□□□ 0.91
COL9A1-205ENST00000447041 LOXHD1Q8IVV2 1947 aa20.72■□□□□ 0.91
COL9A1-205ENST00000447041 IGKV6D-21A0A0A0MT36 114 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 POTEB3A0JP26 581 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 REC8O95072 547 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 CYP3A4P08684 503 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 NTRK3Q16288 839 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 POTEBQ6S5H4 581 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 CCDC60Q8IWA6 550 aaPredicted RBP20.71■□□□□ 0.91
COL9A1-205ENST00000447041 REXO1Q8N1G1 1221 aaKnown RBP20.71■□□□□ 0.91
COL9A1-205ENST00000447041 RASGRP4Q8TDF6 673 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 LINC01599Q8WXQ3 324 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 SAMD11Q96NU1 681 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 C6orf50Q9HD87 102 aa20.71■□□□□ 0.91
COL9A1-205ENST00000447041 BACH1O14867 736 aa20.7■□□□□ 0.9
COL9A1-205ENST00000447041 DHX15O43143 795 aaKnown RBP20.7■□□□□ 0.9
COL9A1-205ENST00000447041 CD52P31358 61 aa20.7■□□□□ 0.9
COL9A1-205ENST00000447041 ABHD15Q6UXT9 468 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms