RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TAF6LQ9Y6J9 622 aa27.99■■■□□ 2.07
PMS1-214ENST00000446877 MYO7AQ13402 2215 aa27.99■■■□□ 2.07
PMS1-214ENST00000446877 MBLAC1A4D2B0 266 aaPredicted RBP27.98■■■□□ 2.07
PMS1-214ENST00000446877 RRN3P2A6NIE6 340 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 MBTPS2O43462 519 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 DGKIO75912 1065 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 MMP1P03956 469 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 GSPT1P15170 499 aaKnown RBP27.98■■■□□ 2.07
PMS1-214ENST00000446877 CHMLP26374 656 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 IGBP1P78318 339 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 MRPS6P82932 125 aaKnown RBP27.98■■■□□ 2.07
PMS1-214ENST00000446877 SMAD4Q13485 552 aaKnown RBP27.98■■■□□ 2.07
PMS1-214ENST00000446877 MTMR1Q13613 665 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 IER5Q5VY09 327 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 TNPO1Q92973 898 aaKnown RBP27.98■■■□□ 2.07
PMS1-214ENST00000446877 PKD2L1Q9P0L9 805 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 PLAGL2Q9UPG8 496 aa27.98■■■□□ 2.07
PMS1-214ENST00000446877 ITGB5P18084 799 aa27.97■■■□□ 2.07
PMS1-214ENST00000446877 ANTXR2P58335 489 aa27.97■■■□□ 2.07
PMS1-214ENST00000446877 CASC1Q6TDU7 716 aa27.97■■■□□ 2.07
PMS1-214ENST00000446877 NFXL1Q6ZNB6 911 aa27.97■■■□□ 2.07
PMS1-214ENST00000446877 MFSD14AQ96MC6 490 aa27.97■■■□□ 2.07
PMS1-214ENST00000446877 MYL10Q9BUA6 226 aa27.97■■■□□ 2.07
PMS1-214ENST00000446877 FTHL17Q9BXU8 183 aa27.97■■■□□ 2.07
PMS1-214ENST00000446877 FAM49AQ9H0Q0 323 aaPredicted RBP27.97■■■□□ 2.07
PMS1-214ENST00000446877 CD207Q9UJ71 328 aa27.97■■■□□ 2.07
PMS1-214ENST00000446877 SPDYE3A6NKU9 549 aa27.96■■■□□ 2.07
PMS1-214ENST00000446877 M0QZ92 97 aa27.96■■■□□ 2.07
PMS1-214ENST00000446877 MAFGO15525 162 aa27.96■■■□□ 2.07
PMS1-214ENST00000446877 CD52P31358 61 aa27.96■■■□□ 2.07
PMS1-214ENST00000446877 NAALADL2Q58DX5 795 aa27.96■■■□□ 2.07
PMS1-214ENST00000446877 MARCH8Q5T0T0 291 aa27.96■■■□□ 2.07
PMS1-214ENST00000446877 MB21D2Q8IYB1 491 aaPredicted RBP27.96■■■□□ 2.07
PMS1-214ENST00000446877 P2RX5Q93086 422 aa27.96■■■□□ 2.07
PMS1-214ENST00000446877 AGO3Q9H9G7 860 aaKnown RBP27.96■■■□□ 2.07
PMS1-214ENST00000446877 LY9Q9HBG7 655 aa27.96■■■□□ 2.07
PMS1-214ENST00000446877 STXBP3O00186 592 aa27.95■■■□□ 2.06
PMS1-214ENST00000446877 NDUFV1P49821 464 aa27.95■■■□□ 2.06
PMS1-214ENST00000446877 MRE11P49959 708 aa27.95■■■□□ 2.06
PMS1-214ENST00000446877 CMTR2Q8IYT2 770 aaKnown RBP27.95■■■□□ 2.06
PMS1-214ENST00000446877 TMTC2Q8N394 836 aa27.95■■■□□ 2.06
PMS1-214ENST00000446877 FBXL18Q96ME1 805 aa27.95■■■□□ 2.06
PMS1-214ENST00000446877 AZI2Q9H6S1 392 aa27.95■■■□□ 2.06
PMS1-214ENST00000446877 MUTYHQ9UIF7 546 aa27.95■■■□□ 2.06
PMS1-214ENST00000446877 UBIAD1Q9Y5Z9 338 aa27.95■■■□□ 2.06
PMS1-214ENST00000446877 MRPL42Q9Y6G3 142 aaKnown RBP27.95■■■□□ 2.06
PMS1-214ENST00000446877 CCDC69A6NI79 296 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 TBX10O75333 385 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 STAG3L1P0CL83 205 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 INSRRP14616 1297 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 PDE4AP27815 886 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 GTF2F1P35269 517 aaKnown RBP eCLIP27.94■■■□□ 2.06
PMS1-214ENST00000446877 NHLH1Q02575 133 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 ADAM15Q13444 863 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 HFE2Q6ZVN8 426 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 NPAS4Q8IUM7 802 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 SQORQ9Y6N5 450 aa27.94■■■□□ 2.06
PMS1-214ENST00000446877 LINC01565O15544 149 aa27.93■■■□□ 2.06
PMS1-214ENST00000446877 PLEKHA8P1O95397 391 aa27.93■■■□□ 2.06
PMS1-214ENST00000446877 HERC4Q5GLZ8 1057 aaPredicted RBP27.93■■■□□ 2.06
PMS1-214ENST00000446877 RNF135Q8IUD6 432 aa27.93■■■□□ 2.06
PMS1-214ENST00000446877 SRBD1Q8N5C6 995 aaKnown RBP27.93■■■□□ 2.06
PMS1-214ENST00000446877 MTA3Q9BTC8 594 aa27.93■■■□□ 2.06
PMS1-214ENST00000446877 JPH1Q9HDC5 661 aaPredicted RBP27.93■■■□□ 2.06
PMS1-214ENST00000446877 JADE2Q9NQC1 790 aa27.93■■■□□ 2.06
PMS1-214ENST00000446877 TRPC6Q9Y210 931 aa27.93■■■□□ 2.06
PMS1-214ENST00000446877 SGSM2O43147 1006 aa27.92■■■□□ 2.06
PMS1-214ENST00000446877 PRC1O43663 620 aa27.92■■■□□ 2.06
PMS1-214ENST00000446877 CAMK1Q14012 370 aa27.92■■■□□ 2.06
PMS1-214ENST00000446877 MAP4K1Q92918 833 aa27.92■■■□□ 2.06
PMS1-214ENST00000446877 PCDHA6Q9UN73 950 aa27.92■■■□□ 2.06
PMS1-214ENST00000446877 PCDHA8Q9Y5H6 950 aa27.92■■■□□ 2.06
PMS1-214ENST00000446877 TRPV2Q9Y5S1 764 aa27.92■■■□□ 2.06
PMS1-214ENST00000446877 RALGAPA2Q2PPJ7 1873 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 C5orf42Q9H799 3197 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 CALM1P0DP23 149 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 CALM2P0DP24 149 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 CALM3P0DP25 149 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 TMEM62Q0P6H9 643 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 PAK2Q13177 524 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 UBE2SQ16763 222 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 PAN2Q504Q3 1202 aaKnown RBP27.91■■■□□ 2.06
PMS1-214ENST00000446877 RTN4RL1Q86UN2 441 aaPredicted RBP27.91■■■□□ 2.06
PMS1-214ENST00000446877 CMTR1Q8N1G2 835 aaKnown RBP27.91■■■□□ 2.06
PMS1-214ENST00000446877 SPPL3Q8TCT6 385 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 LINC01599Q8WXQ3 324 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 ZBTB10Q96DT7 871 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 LRFN2Q9ULH4 789 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 PADI3Q9ULW8 664 aa27.91■■■□□ 2.06
PMS1-214ENST00000446877 ITGB1P05556 798 aa27.9■■■□□ 2.06
PMS1-214ENST00000446877 MCM5P33992 734 aa27.9■■■□□ 2.06
PMS1-214ENST00000446877 KLHL23Q8NBE8 558 aa27.9■■■□□ 2.06
PMS1-214ENST00000446877 SLC9A2Q9UBY0 812 aa27.9■■■□□ 2.06
PMS1-214ENST00000446877 PCDHA2Q9Y5H9 948 aa27.9■■■□□ 2.06
PMS1-214ENST00000446877 RBM8AQ9Y5S9 174 aaKnown RBP27.9■■■□□ 2.06
PMS1-214ENST00000446877 WDFY4Q6ZS81 3184 aa27.9■■■□□ 2.06
PMS1-214ENST00000446877 TRIOO75962 3097 aa27.9■■■□□ 2.06
PMS1-214ENST00000446877 NLRC5Q86WI3 1866 aa27.89■■■□□ 2.06
PMS1-214ENST00000446877 SCG2P13521 617 aa27.89■■■□□ 2.06
PMS1-214ENST00000446877 CCDC82Q8N4S0 544 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms