RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 MYCT1Q8N699 235 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 ACRBPQ8NEB7 543 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 NACC1Q96RE7 527 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 PRDM10Q9NQV6 1147 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 FAM207AQ9NSI2 230 aaPredicted RBP10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 RNF146Q9NTX7 359 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 COL4A3BPQ9Y5P4 624 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 TESPA1A2RU30 521 aaPredicted RBP10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 C19orf81C9J6K1 198 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 FAM13AO94988 1023 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 TUBB4AP04350 444 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 COG2Q14746 738 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 PGM5Q15124 567 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 ZCWPW2Q504Y3 356 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 UTP14CQ5TAP6 766 aaKnown RBP10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 PCNX4Q63HM2 1172 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 MAEAQ7L5Y9 396 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 CCDC155Q8N6L0 562 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 RIT2Q99578 217 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 LXNQ9BS40 222 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 CCDC94Q9BW85 323 aaPredicted RBP10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 IRX2Q9BZI1 471 aaPredicted RBP10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 KCTD10Q9H3F6 313 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 ZNHIT6Q9NWK9 470 aaKnown RBP10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 RPTORQ8N122 1335 aa10.53□□□□□ -0.72
COL6A4P1-201ENST00000446690 URI1O94763 535 aaPredicted RBP10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 CASQ1P31415 396 aa10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 NAA30Q147X3 362 aaPredicted RBP10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 KNOP1Q1ED39 458 aaKnown RBP10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 ZNF397Q8NF99 534 aaPredicted RBP10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 AGO4Q9HCK5 861 aaKnown RBP10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 JADE2Q9NQC1 790 aa10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 V9GYY5 206 aaPredicted RBP10.52□□□□□ -0.72
COL6A4P1-201ENST00000446690 ADM5C9JUS6 153 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 USP2O75604 605 aaPredicted RBP10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 NR2F2P24468 414 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 DSG3P32926 999 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 DMTNQ08495 405 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 KCNA1Q09470 495 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 ITGB3BPQ13352 177 aaPredicted RBP10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 C1orf186Q6ZWK4 172 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 GPIHBP1Q8IV16 184 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 RETREG2Q8NC44 543 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 SMCR8Q8TEV9 937 aaPredicted RBP10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 DCPSQ96C86 337 aaKnown RBP10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 ERGIC2Q96RQ1 377 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 WDR24Q96S15 920 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 PXMP2Q9NR77 195 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 MAP3K20Q9NYL2 800 aaKnown RBP10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 TCEAL9Q9UHQ7 104 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZHX1Q9UKY1 873 aaPredicted RBP10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 PPP2R3BQ9Y5P8 575 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 UBIAD1Q9Y5Z9 338 aa10.52□□□□□ -0.73
COL6A4P1-201ENST00000446690 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 ARHGEF35A5YM69 484 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 CETN3O15182 167 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 CTIFO43310 598 aaKnown RBP10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 FDX1P10109 184 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 BCRP11274 1271 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 NMT1P30419 496 aaKnown RBP10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 TMEM132BQ14DG7 1078 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 ARHGAP29Q52LW3 1261 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 SULF1Q8IWU6 871 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 CEP63Q96MT8 703 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 DNAJC7Q99615 494 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 SH2D3AQ9BRG2 576 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 PNMA2Q9UL42 364 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 AFG3L2Q9Y4W6 797 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 EPN1Q9Y6I3 576 aaPredicted RBP10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 PHLPP2Q6ZVD8 1323 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 A0A0U1RQG5 324 aaPredicted RBP10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 EPHB6O15197 1021 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 CLIC2O15247 247 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 FANCGO15287 622 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 DHX15O43143 795 aaKnown RBP10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 ATP9AO75110 1047 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 GNA14O95837 355 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 FECHP22830 423 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 HOXD13P35453 343 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZBED6P86452 979 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 VGLL4Q14135 290 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZC2HC1CQ53FD0 456 aaPredicted RBP10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 WDR59Q6PJI9 974 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 CATSPERGQ6ZRH7 1159 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 KSR1Q8IVT5 923 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 KCTD17Q8N5Z5 321 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 PDCD2LQ9BRP1 358 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 TTYH3Q9C0H2 523 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 PARVGQ9HBI0 331 aa10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 ADARB2Q9NS39 739 aaKnown RBP10.51□□□□□ -0.73
COL6A4P1-201ENST00000446690 CALUO43852 315 aaPredicted RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 KIF5CO60282 957 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 NDUFA10O95299 355 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 SLU7O95391 586 aaKnown RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 ABL1P00519 1130 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms