RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 GRB10Q13322 594 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 NEDD9Q14511 834 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 MCM6Q14566 821 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 RESP18Q5W5W9 173 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 IQSEC1Q6DN90 963 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 METTL7BQ6UX53 244 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 CXCL17Q6UXB2 119 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 CATSPER3Q86XQ3 398 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 MRPS27Q92552 414 aaKnown RBP8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 VTI1AQ96AJ9 217 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 CDK5RAP3Q96JB5 506 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 CDHR1Q96JP9 859 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF668Q96K58 619 aaPredicted RBP8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 RIT2Q99578 217 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 LXNQ9BS40 222 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 BLZF1Q9H2G9 400 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 TBC1D22BQ9NU19 505 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 SEPT9Q9UHD8 586 aaPredicted RBP8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 DDX20Q9UHI6 824 aaKnown RBP8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 GNEQ9Y223 722 aaKnown RBP8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 WDR64B1ANS9 1081 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 TBX3O15119 743 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 SEPT4O43236 478 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF862O60290 1169 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 SLITRK3O94933 977 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 BMP15O95972 392 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 GNRH1P01148 92 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 LGALS2P05162 132 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 PSAPP07602 524 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 PRR29P0C7W0 189 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 SPATA31C1P0DKV0 1188 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 ATP4AP20648 1035 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 LONP1P36776 959 aaKnown RBP8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 STAT6P42226 847 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF200P98182 395 aaPredicted RBP8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 KRT76Q01546 638 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 PRKCEQ02156 737 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 PPP2R5CQ13362 524 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 FSCN1Q16658 493 aaKnown RBP8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 LONRF3Q496Y0 759 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 MTERF2Q49AM1 385 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 FAM47CQ5HY64 1035 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 GNASQ5JWF2 1037 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 COL13A1Q5TAT6 717 aaPredicted RBP8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 MAP3K21Q5TCX8 1036 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 KRT79Q5XKE5 535 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 ATL3Q6DD88 541 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 ISM2Q6H9L7 571 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 MIS18BP1Q6P0N0 1132 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 FBXO46Q6PJ61 603 aaPredicted RBP8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 ABHD15Q6UXT9 468 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 MSL3Q8N5Y2 521 aaKnown RBP8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 IGSF22Q8N9C0 903 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 SEPT1Q8WYJ6 367 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 GZF1Q9H116 711 aaPredicted RBP8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF302Q9NR11 478 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 FAM13BQ9NYF5 915 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 KCNH3Q9ULD8 1083 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 TRPC6Q9Y210 931 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 NFASCO94856 1347 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 BRCA2P51587 3418 aa8.47□□□□□ -1.05
SF3A3P1-201ENST00000446317 GOLGA6L22H0YM25 854 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 LAD1O00515 517 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 CTAGE5O15320 804 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 TFRCP02786 760 aaKnown RBP8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 PRPHP41219 470 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 SYKP43405 635 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 ATN1P54259 1190 aaPredicted RBP8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 PRMT2P55345 433 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 LAMC2Q13753 1193 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 EPHA7Q15375 998 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 KCNA10Q16322 511 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 RRAGBQ5VZM2 374 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 ARL6IP4Q66PJ3 421 aaKnown RBP8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 LHX8Q68G74 356 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 ADALQ6DHV7 355 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF746Q6NUN9 644 aaPredicted RBP8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 CCDC73Q6ZRK6 1079 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 DYMQ7RTS9 669 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 TRMT44Q8IYL2 757 aaKnown RBP8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 DIS3LQ8TF46 1054 aaKnown RBP8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 RNPEPQ9H4A4 650 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 DACT1Q9NYF0 836 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 PCDHA10Q9Y5I2 948 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 KIAA1217Q5T5P2 1943 aa8.46□□□□□ -1.05
SF3A3P1-201ENST00000446317 TCHHQ07283 1943 aa8.46□□□□□ -1.06
SF3A3P1-201ENST00000446317 USO1O60763 962 aaKnown RBP8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 ADAMTS4O75173 837 aa8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 DUSP11O75319 330 aaKnown RBP8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 GJB1P08034 283 aa8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 CMA1P23946 247 aa8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 TXLNAP40222 546 aa8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 STAT5BP51692 787 aa8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 JAK3P52333 1124 aa8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 UBE2HP62256 183 aa8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 ORC2Q13416 577 aaPredicted RBP8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 HIC1Q14526 733 aa8.45□□□□□ -1.06
SF3A3P1-201ENST00000446317 LRRC41Q15345 812 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms