RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	THOC1	Q96FV9	657 aa	Known RBP	13.73	□□□□□ -0.21
DDR1-238	ENST00000446312	PYM1	Q9BRP8	204 aa	Known RBP	13.73	□□□□□ -0.21
DDR1-238	ENST00000446312	ADAM33	Q9BZ11	813 aa		13.73	□□□□□ -0.21
DDR1-238	ENST00000446312	TSGA10	Q9BZW7	698 aa		13.73	□□□□□ -0.21
DDR1-238	ENST00000446312	VIPAS39	Q9H9C1	493 aa		13.73	□□□□□ -0.21
DDR1-238	ENST00000446312	OSGEP	Q9NPF4	335 aa		13.73	□□□□□ -0.21
DDR1-238	ENST00000446312	FBXL5	Q9UKA1	691 aa		13.73	□□□□□ -0.21
DDR1-238	ENST00000446312	KRIT1	O00522	736 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	PDHB	P11177	359 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	NR2F2	P24468	414 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	GNA11	P29992	359 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	HOXA13	P31271	388 aa	Predicted RBP	13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	ADCY7	P51828	1080 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	MFSD14B	Q5SR56	506 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	DAAM2	Q86T65	1068 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	PIGO	Q8TEQ8	1089 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	ZNF473	Q8WTR7	871 aa	Known RBP	13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	ERGIC2	Q96RQ1	377 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	DDX25	Q9UHL0	483 aa	Known RBP	13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	PCDHA12	Q9UN75	941 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	COL4A3BP	Q9Y5P4	624 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	ANO9	A1A5B4	782 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	GRID2IP	A4D2P6	1211 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	NOL4	O94818	638 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	GCK	P35557	465 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	GTF2I	P78347	998 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	PRR16	Q569H4	304 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	HGSNAT	Q68CP4	663 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	CENPP	Q6IPU0	288 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	MMGT1	Q8N4V1	131 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	GLG1	Q92896	1179 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	TMOD4	Q9NZQ9	345 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	PCDHAC2	Q9Y5I4	1007 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	CHD4	Q14839	1912 aa		13.72	□□□□□ -0.21
DDR1-238	ENST00000446312	KLHL33	A6NCF5	533 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	GOLGA8K	D6RF30	607 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	KCNH2	Q12809	1159 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	PAK2	Q13177	524 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	DGKH	Q86XP1	1220 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	SPICE1	Q8N0Z3	855 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	FAM84A	Q96KN4	292 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	C7orf25	Q9BPX7	421 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	STRC	Q7RTU9	1775 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	BAG3	O95817	575 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	KRT13	P13646	458 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	MAGOH	P61326	146 aa	Known RBP	13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	LRRC55	Q6ZSA7	311 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	UNC13D	Q70J99	1090 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	OTUD6A	Q7L8S5	288 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	CYP2W1	Q8TAV3	490 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	TBC1D22A	Q8WUA7	517 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	RAD54L	Q92698	747 aa		13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	MAGOHB	Q96A72	148 aa	Known RBP	13.71	□□□□□ -0.21
DDR1-238	ENST00000446312	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	PALM3	A6NDB9	673 aa	Predicted RBP	13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	TUBB	P07437	444 aa		13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	GNAQ	P50148	359 aa		13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	IRX1	P78414	480 aa	Predicted RBP	13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	DOK7	Q18PE1	504 aa		13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	NLRP14	Q86W24	1093 aa		13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	HAUS2	Q9NVX0	235 aa		13.71	□□□□□ -0.22
DDR1-238	ENST00000446312	ODF2L	Q9ULJ1	636 aa		13.71	□□□□□ -0.22
DDR1-238	ENST00000446312		M0R2N6	131 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	SKAP2	O75563	359 aa	Predicted RBP	13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	MYB	P10242	640 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	RFC4	P35249	363 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	FAM182A	Q5T1J6	154 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	CCDC84	Q86UT8	332 aa	Predicted RBP	13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	RPGRIP1	Q96KN7	1286 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	ACP6	Q9NPH0	428 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	CNOT8	Q9UFF9	292 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	PTPN22	Q9Y2R2	807 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	CD2AP	Q9Y5K6	639 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	CIC	Q96RK0	1608 aa	Predicted RBP	13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	UBAP1L	F5GYI3	381 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	SART1	O43290	800 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	HSD17B3	P37058	310 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	RCAN1	P53805	252 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	CLNS1A	P54105	237 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	PEX26	Q7Z412	305 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	ITFG2	Q969R8	447 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	ZMYND12	Q9H0C1	365 aa		13.7	□□□□□ -0.22
DDR1-238	ENST00000446312	CALCA	P01258	141 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	PLA2G4B	P0C869	781 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	VPS41	P49754	854 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	NAA25	Q14CX7	972 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	LRRC14	Q15048	493 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	CPLX4	Q7Z7G2	160 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	CPNE8	Q86YQ8	564 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	PURB	Q96QR8	312 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	EMILIN3	Q9NT22	766 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	RGL1	Q9NZL6	768 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	SNX24	Q9Y343	169 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	DDX39A	O00148	427 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	TRIM49	P0CI25	452 aa		13.69	□□□□□ -0.22

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