RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 CCNYQ8ND76 341 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 FAM71BQ8TC56 605 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 HEXIM2Q96MH2 286 aaKnown RBP12.64□□□□□ -0.39
FN1-212ENST00000446046 KLHL14Q9P2G3 628 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 PIK3C2BO00750 1634 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 STXBP3O00186 592 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 UTYO14607 1347 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 GH2P01242 217 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 JADE1Q6IE81 842 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 DGKHQ86XP1 1220 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 SPATS2Q86XZ4 545 aaKnown RBP12.64□□□□□ -0.39
FN1-212ENST00000446046 DYRK4Q9NR20 520 aa12.64□□□□□ -0.39
FN1-212ENST00000446046 N4BP2L2Q92802 583 aaPredicted RBP12.64□□□□□ -0.39
FN1-212ENST00000446046 A0A1W2PQ27 194 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 A0A1W2PQ64 194 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 A0A1W2PQD8 194 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 CTNNA1P35221 906 aaKnown RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 MXI1P50539 228 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 CHEK2O96017 543 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 MMP1P03956 469 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 LPAR1Q92633 364 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 EVI5O60447 810 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 SNAPC2Q13487 334 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 PROM2Q8N271 834 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 ZBTB5O15062 677 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 CYP2E1P05181 493 aaPredicted RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 PLA2G4BP0C869 781 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 RCAN1P53805 252 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 TTC31Q49AM3 519 aaPredicted RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 ZNF653Q96CK0 615 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 ARPP19P56211 112 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 STX1BP61266 288 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 PCGF5Q86SE9 256 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 CARD6Q9BX69 1037 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 MRPL4Q9BYD3 311 aaKnown RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 GCOM2Q9BZD3 368 aaPredicted RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 NXF1Q9UBU9 619 aaKnown RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 TLK1Q9UKI8 766 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 KCNQ3O43525 872 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 MOCS3O95396 460 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 PCK1P35558 622 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 OTUD7AQ8TE49 926 aaPredicted RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 SH3TC2Q8TF17 1288 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 STAG1Q8WVM7 1258 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 PARK7Q99497 189 aaKnown RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 MYH15Q9Y2K3 1946 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 TJP3O95049 919 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 CLCN1P35523 988 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 PDE1BQ01064 536 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 TBC1D10BQ4KMP7 808 aaPredicted RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 SLC10A5Q5PT55 438 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 ACAP3Q96P50 834 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 ZFYVE28Q9HCC9 887 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 RNF14Q9UBS8 474 aa12.63□□□□□ -0.39
FN1-212ENST00000446046 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.63□□□□□ -0.39
FN1-212ENST00000446046 STMN1P16949 149 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 BRD3Q15059 726 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
FN1-212ENST00000446046 PBKQ96KB5 322 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 ERCC3P19447 782 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 SCRN1Q12765 414 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 STAMQ92783 540 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 P2RX5Q93086 422 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 TIPINQ9BVW5 301 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 EFCC1Q9HA90 598 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 APBA1Q02410 837 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 GBP7Q8N8V2 638 aaPredicted RBP12.62□□□□□ -0.39
FN1-212ENST00000446046 MAP4K1Q92918 833 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 LRGUKQ96M69 825 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 PPP1R12CQ9BZL4 782 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 OLA1Q9NTK5 396 aaKnown RBP12.62□□□□□ -0.39
FN1-212ENST00000446046 ALDH1A1P00352 501 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 EEPD1Q7L9B9 569 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 ACAD9Q9H845 621 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 SEC31BQ9NQW1 1179 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
FN1-212ENST00000446046 NEMP1O14524 444 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 HMGB3O15347 200 aaKnown RBP12.62□□□□□ -0.39
FN1-212ENST00000446046 SAT1P21673 171 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 EPN1Q9Y6I3 576 aaPredicted RBP12.62□□□□□ -0.39
FN1-212ENST00000446046 WDR19Q8NEZ3 1342 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L15C9J2P7 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L13C9JLJ4 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L11C9JVI0 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L18D6R9N7 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L22D6RA61 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L17D6RBQ6 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L19D6RCP7 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L20D6RJB6 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 USP17L24Q0WX57 530 aa12.62□□□□□ -0.39
FN1-212ENST00000446046 SNRNP48Q6IEG0 339 aaKnown RBP12.62□□□□□ -0.39
FN1-212ENST00000446046 TRIM45Q9H8W5 580 aaPredicted RBP12.62□□□□□ -0.39
FN1-212ENST00000446046 IFNAR1P17181 557 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms