RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 TNFRSF8P28908 595 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 FZD5Q13467 585 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 ZNF852Q6ZMS4 543 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 OR6J1Q8NGC5 347 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 FCRL3Q96P31 734 aaPredicted RBP7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 TMX2Q9Y320 296 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 SPTA1P02549 2419 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 ITPR1Q14643 2758 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 POLGP54098 1239 aaPredicted RBP7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 ADCY1Q08828 1119 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 SLC44A4Q53GD3 710 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 TRPV5Q9NQA5 729 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 FAM217BQ9NTX9 383 aaPredicted RBP7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 SYNPO2Q9UMS6 1093 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 LAMA4Q16363 1823 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 PI4KAP2A4QPH2 592 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 CXCL12P48061 93 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 SEMA3BQ13214 749 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 METTL24Q5JXM2 366 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 PI4KAP1Q8N8J0 262 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 BAP1Q92560 729 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 NOL10Q9BSC4 688 aaKnown RBP7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 ARHGEF10LQ9HCE6 1279 aa7.81□□□□□ -1.16
BRAFP1-201ENST00000445336 B4GALT3O60512 393 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 CALD1Q05682 793 aaKnown RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 LY6DQ14210 128 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 RARS2Q5T160 578 aaKnown RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 AGMOQ6ZNB7 445 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 TMPRSS7Q7RTY8 843 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 TEX11Q8IYF3 940 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 SNIP1Q8TAD8 396 aaKnown RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 MICAL1Q8TDZ2 1067 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 ZNF428Q96B54 188 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 MPHOSPH6Q99547 160 aaKnown RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 WDR6Q9NNW5 1121 aaKnown RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 ADAMTS8Q9UP79 889 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 IL16Q14005 1332 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 BAG3O95817 575 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 RPL17P18621 184 aaKnown RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 MTAPQ13126 283 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 LMBR1LQ6UX01 489 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 ATG14Q6ZNE5 492 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 ACER1Q8TDN7 264 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 EMID1Q96A84 441 aaPredicted RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 MAN2B2Q9Y2E5 1009 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 HEMK1Q9Y5R4 338 aaPredicted RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 C2orf16Q68DN1 1984 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 FGF18O76093 207 aa7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 MRPL43Q8N983 215 aaKnown RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 PURBQ96QR8 312 aaKnown RBP7.8□□□□□ -1.16
BRAFP1-201ENST00000445336 PTPRBP23467 1997 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 HECTD1Q9ULT8 2610 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 ZMYM2Q9UBW7 1377 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 RRP8O43159 456 aaKnown RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 DKK1O94907 266 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 SLURP2P0DP57 97 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 VASPP50552 380 aaPredicted RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 LRRC32Q14392 662 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 CERKLQ49MI3 558 aaPredicted RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 MOCOSQ96EN8 888 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 STK31Q9BXU1 1019 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 IQSEC3Q9UPP2 1182 aaPredicted RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 APOBEC2Q9Y235 224 aaKnown RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 CLUHO75153 1309 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 LCTP09848 1927 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 BCLAF3A2AJT9 711 aaKnown RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 NDUFV2P19404 249 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 ADSSP30520 456 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 ALDH7A1P49419 539 aaKnown RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 RIPK4P57078 832 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 UBXN2BQ14CS0 331 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 CWF19L2Q2TBE0 894 aaKnown RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 BEND3Q5T5X7 828 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 TMC8Q8IU68 726 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 SYNPOQ8N3V7 929 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 PDCD7Q8N8D1 485 aaKnown RBP7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 COLGALT1Q8NBJ5 622 aa7.79□□□□□ -1.16
BRAFP1-201ENST00000445336 PCSK5Q92824 1860 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 B4DLN1 442 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 PER2O15055 1255 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 POU2F2P09086 479 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 TARSP26639 723 aaKnown RBP7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 GUCY1A2P33402 732 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 EIF2S3P41091 472 aaKnown RBP7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 MRPL12P52815 198 aaKnown RBP7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 ERVFC1P60507 584 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 TMEM179Q6ZVK1 233 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 GALNT15Q8N3T1 639 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 DEFB124Q8NES8 71 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 POLR3GLQ9BT43 218 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 EHMT1Q9H9B1 1298 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 SHISA7A6NL88 538 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 K7ESF4 209 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 ENPP3O14638 875 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 KHNYNO15037 678 aaKnown RBP7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 FAM155BO75949 473 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 ANKRD35Q8N283 1001 aa7.78□□□□□ -1.16
BRAFP1-201ENST00000445336 FBN2P35556 2912 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms