RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NT5C3AQ9H0P0 336 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 CHRDQ9H2X0 955 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 NCOR1P1Q9H4R4 102 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 LIN28AQ9H9Z2 209 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 PAPOLBQ9NRJ5 636 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 CABP1Q9NZU7 370 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 TRAF3IP3Q9Y228 551 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 PCDHGB6Q9Y5F9 930 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 RTN2O75298 545 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 PALMO75781 387 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 ASLP04424 464 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 CCDC172P0C7W6 258 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 ALAS2P22557 587 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 KRT9P35527 623 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 AKAP17AQ02040 695 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 SKOR2Q2VWA4 1001 aaPredicted RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 PLA2G4EQ3MJ16 856 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 MORN1Q5T089 497 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 CLASP1Q7Z460 1538 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 CCDC84Q86UT8 332 aaPredicted RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 SPATA2LQ8IUW3 424 aaPredicted RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 ADAMTS15Q8TE58 950 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 UTP15Q8TED0 518 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 HPS3Q969F9 1004 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 DDX23Q9BUQ8 820 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 SERINC1Q9NRX5 453 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 L1RE1Q9UN81 338 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 PAXBP1Q9Y5B6 917 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 KIF13AQ9H1H9 1805 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 MEIS3P2A8K0S8 358 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 F8VZ95 297 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 CCP110O43303 1012 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 NCK2O43639 380 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 ATE1O95260 518 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 PYGMP11217 842 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 IMPDH2P12268 514 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 TNFSF4P23510 183 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 HOXA11P31270 313 aaPredicted RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 ADCYAP1R1P41586 468 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 KCNJ6P48051 423 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 SMAD4Q13485 552 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 MPP2Q14168 576 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 POSTNQ15063 836 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 IZUMO3Q5VZ72 239 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 SYNE3Q6ZMZ3 975 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 GOT1L1Q8NHS2 421 aaPredicted RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 DIS3LQ8TF46 1054 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 RTF1Q92541 710 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 FERD3LQ96RJ6 166 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 PIGSQ96S52 555 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 ACAD9Q9H845 621 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 DZANK1Q9NVP4 752 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 SIRT5Q9NXA8 310 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 SH3BGRL2Q9UJC5 107 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 CACNB4O00305 520 aaPredicted RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 AP1G1O43747 822 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 ZBED4O75132 1171 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 CSTBP04080 98 aaKnown RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 ZNF853P0CG23 659 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 RAG1P15918 1043 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 TIE1P35590 1138 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 ACTN2P35609 894 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 MCM2P49736 904 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 FOXO1Q12778 655 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 ZMYM1Q5SVZ6 1142 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 UBXN11Q5T124 520 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 MTHFD1LQ6UB35 978 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 DCLK2Q8N568 766 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 MCM9Q9NXL9 1143 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 BARX2Q9UMQ3 279 aaPredicted RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 PQBP1O60828 265 aaKnown RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 INHAP05111 366 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 TPM3P06753 285 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 SRGAP2BP0DMP2 458 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 ASMTP46597 345 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 PMS1P54277 932 aaKnown RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 CCNA1P78396 465 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 UBXN1Q04323 297 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 ANKRD1Q15327 319 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 PPP4R3BQ5MIZ7 849 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 IL27RAQ6UWB1 636 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 TTLL7Q6ZT98 887 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 GALNT7Q86SF2 657 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 AVL9Q8NBF6 648 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 ANKK1Q8NFD2 765 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 NEDD1Q8NHV4 660 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 C8orf76Q96K31 380 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 CRBNQ96SW2 442 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 ARHGAP9Q9BRR9 750 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 UTP14AQ9BVJ6 771 aaKnown RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 PLVAPQ9BX97 442 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 RNF38Q9H0F5 515 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 SLC52A2Q9HAB3 445 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 INCENPQ9NQS7 918 aa4.41□□□□□ -1.7
UBR3-206ENST00000444475 OLA1Q9NTK5 396 aaKnown RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 ZHX1Q9UKY1 873 aaPredicted RBP4.41□□□□□ -1.7
UBR3-206ENST00000444475 BCS1LQ9Y276 419 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms