RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 PGRMC1O00264 195 aaKnown RBP12.71□□□□□ -0.37
HCFC1-203ENST00000444191 EXOC3O60645 756 aa12.71□□□□□ -0.37
HCFC1-203ENST00000444191 PPP1R37O75864 691 aa12.71□□□□□ -0.37
HCFC1-203ENST00000444191 MESDQ14696 234 aa12.71□□□□□ -0.37
HCFC1-203ENST00000444191 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.37
HCFC1-203ENST00000444191 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.37
HCFC1-203ENST00000444191 STK17AQ9UEE5 414 aa12.71□□□□□ -0.37
HCFC1-203ENST00000444191 THRAP3Q9Y2W1 955 aaKnown RBP12.71□□□□□ -0.37
HCFC1-203ENST00000444191 GDF11O95390 407 aa12.71□□□□□ -0.38
HCFC1-203ENST00000444191 MCTP2Q6DN12 878 aa12.71□□□□□ -0.38
HCFC1-203ENST00000444191 FBXO33Q7Z6M2 555 aa12.71□□□□□ -0.38
HCFC1-203ENST00000444191 SLF2Q8IX21 1173 aa12.71□□□□□ -0.38
HCFC1-203ENST00000444191 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.38
HCFC1-203ENST00000444191 C4orf32Q8N8J7 132 aa12.71□□□□□ -0.38
HCFC1-203ENST00000444191 ITGA4P13612 1032 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 SNX1Q13596 522 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 TRIP13Q15645 432 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 MMGT1Q8N4V1 131 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 ZNF473Q8WTR7 871 aaKnown RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 ATP6V1G3Q96LB4 118 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 RIC8AQ9NPQ8 531 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 CEP72Q9P209 647 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 MST1RQ04912 1400 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 TRIM49P0CI25 452 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 TRIM49CP0CI26 452 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 TRAPPC3LQ5T215 181 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 HIBCHQ6NVY1 386 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 AENQ8WTP8 325 aaKnown RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 FGFBP2Q9BYJ0 223 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 CAMTA1Q9Y6Y1 1673 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 RGS16O15492 202 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 PLCG2P16885 1265 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 MEA1Q16626 185 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 ADGRF4Q8IZF3 695 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 TAB3Q8N5C8 712 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 ADAM33Q9BZ11 813 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 ZMYND12Q9H0C1 365 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 NT5C3AQ9H0P0 336 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 MAGEF1Q9HAY2 307 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 RGL1Q9NZL6 768 aa12.7□□□□□ -0.38
HCFC1-203ENST00000444191 NOC2LQ9Y3T9 749 aaKnown RBP12.7□□□□□ -0.38
HCFC1-203ENST00000444191 AFPP02771 609 aaKnown RBP12.69□□□□□ -0.38
HCFC1-203ENST00000444191 LRRC14Q15048 493 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 CENPPQ6IPU0 288 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 IKZF4Q9H2S9 585 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 BLOC1S4Q9NUP1 217 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 SAMD15Q9P1V8 674 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 TBK1Q9UHD2 729 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 CTDP1Q9Y5B0 961 aaPredicted RBP12.69□□□□□ -0.38
HCFC1-203ENST00000444191 KIF4AO95239 1232 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 EZRP15311 586 aaKnown RBP12.69□□□□□ -0.38
HCFC1-203ENST00000444191 GRIPAP1Q4V328 841 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 DENND2CQ68D51 928 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 PTF1AQ7RTS3 328 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 CCDC50Q8IVM0 306 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 ANKS4BQ8N8V4 417 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 GLG1Q92896 1179 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 CCDC127Q96BQ5 260 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 NUCKS1Q9H1E3 243 aaKnown RBP12.69□□□□□ -0.38
HCFC1-203ENST00000444191 TAF1DQ9H5J8 278 aaPredicted RBP12.69□□□□□ -0.38
HCFC1-203ENST00000444191 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
HCFC1-203ENST00000444191 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 SLC18A3Q16572 532 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 ASIC3Q9UHC3 531 aa12.69□□□□□ -0.38
HCFC1-203ENST00000444191 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 MDH1P40925 334 aaKnown RBP12.68□□□□□ -0.38
HCFC1-203ENST00000444191 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.38
HCFC1-203ENST00000444191 NSMFQ6X4W1 530 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 TBC1D1Q86TI0 1168 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-203ENST00000444191 PNMA5Q96PV4 448 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 ELAC2Q9BQ52 826 aaKnown RBP12.68□□□□□ -0.38
HCFC1-203ENST00000444191 FRMD4BQ9Y2L6 1034 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 PVALEFA0A1B0GWK0 134 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 ZNF233A6NK53 670 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 CLGNO14967 610 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 SORBS3O60504 671 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 CASP4P49662 377 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 HAUS2Q9NVX0 235 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 PALM3A6NDB9 673 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-203ENST00000444191 CALUO43852 315 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-203ENST00000444191 MYBP10242 640 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 CLNS1AP54105 237 aaKnown RBP12.68□□□□□ -0.38
HCFC1-203ENST00000444191 WHAMMQ8TF30 809 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 ANKS1AQ92625 1134 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 ELMO3Q96BJ8 720 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 FMO2Q99518 471 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
HCFC1-203ENST00000444191 CXorf56Q9H5V9 222 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 CD209Q9NNX6 404 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 SERPINB13Q9UIV8 391 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 DAAM1Q9Y4D1 1078 aa12.68□□□□□ -0.38
HCFC1-203ENST00000444191 ACSL3O95573 720 aa12.67□□□□□ -0.38
HCFC1-203ENST00000444191 EEF2P13639 858 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms