RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ACTRT1Q8TDG2 376 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ZNF317Q96PQ6 595 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 TRAPPC9Q96Q05 1148 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 CYP7A1P22680 504 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 KIF6Q6ZMV9 814 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PABPC3Q9H361 631 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 ZWILCHQ9H900 591 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PIH1D3Q9NQM4 214 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 ATP6V0A2Q9Y487 856 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ABCA6Q8N139 1617 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PRKAB2O43741 272 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PROSER2Q86WR7 435 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 AMACRQ9UHK6 382 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 H7C1W4 665 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PYGLP06737 847 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 NUGGCQ68CJ6 796 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PIGOQ8TEQ8 1089 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 SEC63Q9UGP8 760 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 FOXO4P98177 505 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 LBRQ14739 615 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 CCDC62Q6P9F0 684 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 A6NHS1 94 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 CCDC188H7C350 402 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 WFS1O76024 890 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ACSL3O95573 720 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 BAG2O95816 211 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 STRN3Q13033 797 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 TCIRG1Q13488 830 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 SPTY2D1Q68D10 685 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 DMAP1Q9NPF5 467 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 NKX1-2Q9UD57 310 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 RFC5P40937 340 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 LMNB2Q03252 620 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 DDX12PQ92771 950 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 LRRC59Q96AG4 307 aaKnown RBP5.43□□□□□ -1.54
HERC1-201ENST00000443617 RAB34Q9BZG1 259 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ZBTB3Q9H5J0 574 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 NR1H3Q13133 447 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 MYOCDQ8IZQ8 938 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 MIGA1Q8NAN2 632 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ABTB1Q969K4 478 aaPredicted RBP5.43□□□□□ -1.54
HERC1-201ENST00000443617 ZNF653Q96CK0 615 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ANAPC4Q9UJX5 808 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 CCNG1P51959 295 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 DIXDC1Q155Q3 683 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 MAEAQ7L5Y9 396 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 TPCN2Q8NHX9 752 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 PGM2Q96G03 612 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ATP6V1C1P21283 382 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 RNASELQ05823 741 aaKnown RBP5.43□□□□□ -1.54
HERC1-201ENST00000443617 ZFAND2BQ8WV99 257 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 LZTS2Q9BRK4 669 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 PITPNM3Q9BZ71 974 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 TBC1D7Q9P0N9 293 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 TMEM120BA0PK00 339 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 DCDC2CA8MYV0 355 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 UPP2O95045 317 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 PUM3Q15397 648 aaKnown RBP5.43□□□□□ -1.54
HERC1-201ENST00000443617 FIGNQ5HY92 759 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 MEI1Q5TIA1 1274 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ARHGAP24Q8N264 748 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.43□□□□□ -1.54
HERC1-201ENST00000443617 MTA3Q9BTC8 594 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 TRIM9Q9C026 710 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ABCF2Q9UG63 623 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 PNMA3Q9UL41 463 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 COL4A3BPQ9Y5P4 624 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 GALNT17Q6IS24 598 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ZNF449Q6P9G9 518 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 MTHFD1LQ6UB35 978 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 FAM133AQ8N9E0 248 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 CATSPER2Q96P56 530 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 TRIM51Q9BSJ1 452 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 LRMDAQ9H2I8 198 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 MMP13P45452 471 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 CCDC92Q53HC0 331 aaPredicted RBP5.43□□□□□ -1.54
HERC1-201ENST00000443617 TRMT10CQ7L0Y3 403 aaKnown RBP5.43□□□□□ -1.54
HERC1-201ENST00000443617 PDCD7Q8N8D1 485 aaKnown RBP5.43□□□□□ -1.54
HERC1-201ENST00000443617 SPATA5Q8NB90 893 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ERP44Q9BS26 406 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 INTUQ9ULD6 942 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 LRCH1Q9Y2L9 728 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 PASKQ96RG2 1323 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 CCDC160A6NGH7 325 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 A8MUI8 341 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 LAD1O00515 517 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ZWINTO95229 277 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 USP4Q13107 963 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 LDHAL6AQ6ZMR3 332 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 ASAP3Q8TDY4 903 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 CEMIPQ8WUJ3 1361 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 MYBP10242 640 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 LRRC63Q05C16 580 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 GRAMD1AQ96CP6 724 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 TLCD1Q96CP7 247 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 IWS1Q96ST2 819 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 SLC12A6Q9UHW9 1150 aa5.43□□□□□ -1.54
HERC1-201ENST00000443617 DIS3Q9Y2L1 958 aaKnown RBP5.43□□□□□ -1.54
HERC1-201ENST00000443617 RHOBTB3O94955 611 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms