RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KRT2P35908 639 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 GABPB1Q06547 395 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 NR1I3Q14994 352 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 EARS2Q5JPH6 523 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 SLC30A10Q6XR72 485 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 PIK3AP1Q6ZUJ8 805 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 MIER3Q7Z3K6 550 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 ABI1Q8IZP0 508 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 LENG1Q96BZ8 264 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 MTG1Q9BT17 334 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 ZNF214Q9UL59 606 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 SBF1O95248 1867 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 LPXNO60711 386 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 UPP2O95045 317 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 PLA2G4AP47712 749 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 TERF2Q15554 542 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 ELF2Q15723 593 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 TMTC3Q6ZXV5 915 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 DNERQ8NFT8 737 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 RASGRP4Q8TDF6 673 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 ZNF333Q96JL9 665 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 PURBQ96QR8 312 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 ANO3Q9BYT9 981 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 NRBP2Q9NSY0 501 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 MAN1B1Q9UKM7 699 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 KCNJ14Q9UNX9 436 aa8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 ZNF646O15015 1829 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-208ENST00000442054 GOLGA6L19H0YKK7 550 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 CCNT1O60563 726 aaKnown RBP8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 DUSP11O75319 330 aaKnown RBP8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 TUBB4AP04350 444 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 ASGR1P07306 291 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 GJA8P48165 433 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 RTP1P59025 263 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 GRB14Q14449 540 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 KCNA10Q16322 511 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 CDKAL1Q5VV42 579 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 SYTL5Q8TDW5 730 aaPredicted RBP8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 TBC1D5Q92609 795 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 NAP1L4Q99733 375 aaKnown RBP8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 NAT10Q9H0A0 1025 aaKnown RBP8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 DIS3Q9Y2L1 958 aaKnown RBP8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 PCDHA5Q9Y5H7 936 aa8.21□□□□□ -1.09
CDC42BPA-208ENST00000442054 ADAMTS3O15072 1205 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 NKRFO15226 690 aaKnown RBP eCLIP8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 KPNA6O60684 536 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 SLU7O95391 586 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 MARCKSP29966 332 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 ARHGAP4P98171 946 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 KIAA1755Q5JYT7 1200 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 NCAPH2Q6IBW4 605 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 NOSTRINQ8IVI9 506 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 MICAL1Q8TDZ2 1067 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 IWS1Q96ST2 819 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 PPP1R16BQ96T49 567 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 TCHPQ9BT92 498 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 FOXP1Q9H334 677 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 BMP2KQ9NSY1 1161 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 AKT3Q9Y243 479 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 MROH7Q68CQ1 1323 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 A0A1B0GTH6 734 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 ETF1P62495 437 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 MIS18BP1Q6P0N0 1132 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 FILIP1Q7Z7B0 1213 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 ATP6V0A1Q93050 837 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 FAM161BQ96MY7 647 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 TEKT3Q9BXF9 490 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 FANCLQ9NW38 375 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 TRMT1Q9NXH9 659 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 KIF13BQ9NQT8 1826 aa8.21□□□□□ -1.1
CDC42BPA-208ENST00000442054 KIF2AO00139 706 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 CD44P16070 742 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 MYL5Q02045 173 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 STK38Q15208 465 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 E2F4Q16254 413 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 USP49Q70CQ1 688 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 TMC6Q7Z403 805 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 RPUSD2Q8IZ73 545 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 BLIDQ8IZY5 108 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 RNPC3Q96LT9 517 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 MTRQ99707 1265 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.2□□□□□ -1.12e-7■■□□□ 11.4
CDC42BPA-208ENST00000442054 SRPRBQ9Y5M8 271 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 NAV1Q8NEY1 1877 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 A0A0U1RQG5 324 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 hCG_1984214I3L0E3 225 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 MCM7P33993 719 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 TXKP42681 527 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 SYKP43405 635 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 CLCN6P51797 869 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 DPYDQ12882 1025 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 LY6KQ17RY6 165 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 LRCH2Q5VUJ6 765 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 MYOCDQ8IZQ8 938 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 ZNF713Q8N859 430 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 ENOX1Q8TC92 643 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 OXER1Q8TDS5 423 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 PPP1R13LQ8WUF5 828 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 ARMC5Q96C12 935 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms